- 同
- Semaphorin 4D
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出典(authority):フリー百科事典『ウィキペディア(Wikipedia)』「2016/03/24 08:43:06」(JST)
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Sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4D |
PDB rendering based on 1olz.
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Available structures |
PDB |
Ortholog search: PDBe, RCSB |
List of PDB id codes |
1OLZ, 3OL2
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Identifiers |
Symbols |
SEMA4D ; C9orf164; CD100; M-sema-G; SEMAJ; coll-4 |
External IDs |
OMIM: 601866 MGI: 109244 HomoloGene: 21282 GeneCards: SEMA4D Gene |
Gene ontology |
Molecular function |
• receptor activity
• transmembrane signaling receptor activity
• receptor binding
• protein binding
• semaphorin receptor binding
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Cellular component |
• extracellular space
• plasma membrane
• integral component of plasma membrane
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Biological process |
• negative regulation of transcription from RNA polymerase II promoter
• positive regulation of protein phosphorylation
• immune response
• cell adhesion
• negative regulation of cell adhesion
• axon guidance
• regulation of cell shape
• negative regulation of alkaline phosphatase activity
• positive regulation of phosphatidylinositol 3-kinase signaling
• positive regulation of cell migration
• regulation of cell projection organization
• negative regulation of apoptotic process
• positive regulation of GTPase activity
• ossification involved in bone maturation
• negative regulation of osteoblast differentiation
• positive regulation of collateral sprouting
• regulation of dendrite morphogenesis
• positive regulation of peptidyl-tyrosine phosphorylation
• negative regulation of peptidyl-tyrosine phosphorylation
• leukocyte aggregation
• semaphorin-plexin signaling pathway
• semaphorin-plexin signaling pathway involved in bone trabecula morphogenesis
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Sources: Amigo / QuickGO |
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RNA expression pattern |
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More reference expression data |
Orthologs |
Species |
Human |
Mouse |
Entrez |
10507 |
20354 |
Ensembl |
ENSG00000187764 |
ENSMUSG00000021451 |
UniProt |
Q92854 |
O09126 |
RefSeq (mRNA) |
NM_001142287 |
NM_001281880 |
RefSeq (protein) |
NP_001135759 |
NP_001268809 |
Location (UCSC) |
Chr 9:
89.36 – 89.5 Mb |
Chr 13:
51.7 – 51.79 Mb |
PubMed search |
[1] |
[2] |
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Semaphorin-4D (SEMA4D) also known as Cluster of Differentiation 100 (CD100), is a protein of the semaphorin family that in humans is encoded by the SEMA4D gene.[1]
Contents
- 1 Function
- 2 See also
- 3 References
- 4 Further reading
- 5 External links
Function
Semaphorin 4D (Sema 4D) is an axon guidance molecule which is secreted by oligodendrocytes and induces growth cone collapse in the central nervous system. By binding plexin B1 receptor it functions as an R-Ras GTPase-activating protein (GAP) and repels axon growth cones in both the mature central nervous system.[2]
In the immune system, CD100 binds CD72 to activate B cells and dendritic cells, though much about this interaction is still under investigation.[3][4]
During skin damage repairs, SEMA4D interacts with Plexin B2 on gamma delta t cells to play a role in the healing process.[5]
See also
- Cluster of differentiation
References
- ^ "Entrez Gene: SEMA4D sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4D".
- ^ Ito Y, Oinuma I, Katoh H, Kaibuchi K, Negishi M (July 2006). "Sema4D/plexin-B1 activates GSK-3β through R-Ras GAP activity, inducing growth cone collapse". EMBO Reports 7 (7): 704–9. doi:10.1038/sj.embor.7400737. PMC 1500830. PMID 16799460.
- ^ Kumanogoh A, Watanabe C, Lee I, Wang X, Shi W, Araki H, Hirata H, Iwahori K, Uchida J, Yasui T, Matsumoto M, Yoshida K, Yakura H, Pan C, Parnes JR, Kikutani H (November 2000). "Identification of CD72 as a lymphocyte receptor for the class IV semaphorin CD100: a novel mechanism for regulating B cell signaling". Immunity 13 (5): 621–31. doi:10.1016/S1074-7613(00)00062-5. PMID 11114375.
- ^ Ishida I, Kumanogoh A, Suzuki K, Akahani S, Noda K, Kikutani H (August 2003). "Involvement of CD100, a lymphocyte semaphorin, in the activation of the human immune system via CD72: implications for the regulation of immune and inflammatory responses". Int. Immunol. 15 (8): 1027–34. doi:10.1093/intimm/dxg098. PMID 12882840.
- ^ Deborah A. Witherden, Megumi Watanabe, Olivia Garijo, Stephanie E. Rieder, Gor Sarkisyan, Shane J.F. Cronin, Petra Verdino, Ian A. Wilson, Atsushi Kumanogoh, Hitoshi Kikutani, Luc Teyton, Wolfgang H. Fischer, Wendy L. Havran (August 2012). "The CD100 Receptor Interacts with Its Plexin B2 Ligand to Regulate Epidermal γδ T Cell Function". Immunity 37 (2): 314–25. doi:10.1016/j.immuni.2012.05.026.
Further reading
- Bougeret C, Mansur IG, Dastot H, et al. (1992). "Increased surface expression of a newly identified 150-kDa dimer early after human T lymphocyte activation". J. Immunol. 148 (2): 318–23. PMID 1530858.
- Hall KT, Boumsell L, Schultze JL, et al. (1996). "Human CD100, a novel leukocyte semaphorin that promotes B-cell aggregation and differentiation". Proc. Natl. Acad. Sci. U.S.A. 93 (21): 11780–5. doi:10.1073/pnas.93.21.11780. PMC 38135. PMID 8876214.
- Herold C, Elhabazi A, Bismuth G, et al. (1997). "CD100 is associated with CD45 at the surface of human T lymphocytes. Role in T cell homotypic adhesion". J. Immunol. 157 (12): 5262–8. PMID 8955171.
- Furuyama T, Inagaki S, Kosugi A, et al. (1997). "Identification of a novel transmembrane semaphorin expressed on lymphocytes". J. Biol. Chem. 271 (52): 33376–81. doi:10.1074/jbc.271.52.33376. PMID 8969198.
- Tamagnone L, Artigiani S, Chen H, et al. (1999). "Plexins are a large family of receptors for transmembrane, secreted, and GPI-anchored semaphorins in vertebrates". Cell 99 (1): 71–80. doi:10.1016/S0092-8674(00)80063-X. PMID 10520995.
- Elhabazi A, Delaire S, Bensussan A, et al. (2001). "Biological activity of soluble CD100. I. The extracellular region of CD100 is released from the surface of T lymphocytes by regulated proteolysis". J. Immunol. 166 (7): 4341–7. doi:10.4049/jimmunol.166.7.4341. PMID 11254687.
- Delaire S, Billard C, Tordjman R, et al. (2001). "Biological activity of soluble CD100. II. Soluble CD100, similarly to H-SemaIII, inhibits immune cell migration". J. Immunol. 166 (7): 4348–54. doi:10.4049/jimmunol.166.7.4348. PMID 11254688.
- Vikis HG, Li W, Guan KL (2002). "The Plexin-B1/Rac interaction inhibits PAK activation and enhances Sema4D ligand binding". Genes Dev. 16 (7): 836–45. doi:10.1101/gad.966402. PMC 186329. PMID 11937491.
- Granziero L, Circosta P, Scielzo C, et al. (2003). "CD100/Plexin-B1 interactions sustain proliferation and survival of normal and leukemic CD5+ B lymphocytes". Blood 101 (5): 1962–9. doi:10.1182/blood-2002-05-1339. PMID 12406905.
- Strausberg RL, Feingold EA, Grouse LH, et al. (2003). "Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences". Proc. Natl. Acad. Sci. U.S.A. 99 (26): 16899–903. doi:10.1073/pnas.242603899. PMC 139241. PMID 12477932.
- Izmailova E, Bertley FM, Huang Q, et al. (2003). "HIV-1 Tat reprograms immature dendritic cells to express chemoattractants for activated T cells and macrophages". Nat. Med. 9 (2): 191–7. doi:10.1038/nm822. PMID 12539042.
- Love CA, Harlos K, Mavaddat N, et al. (2003). "The ligand-binding face of the semaphorins revealed by the high-resolution crystal structure of SEMA4D". Nat. Struct. Biol. 10 (10): 843–8. doi:10.1038/nsb977. PMID 12958590.
- Giraudon P, Vincent P, Vuaillat C, et al. (2004). "Semaphorin CD100 from activated T lymphocytes induces process extension collapse in oligodendrocytes and death of immature neural cells". J. Immunol. 172 (2): 1246–55. doi:10.4049/jimmunol.172.2.1246. PMID 14707103.
- Gerhard DS, Wagner L, Feingold EA, et al. (2004). "The Status, Quality, and Expansion of the NIH Full-Length cDNA Project: The Mammalian Gene Collection (MGC)". Genome Res. 14 (10B): 2121–7. doi:10.1101/gr.2596504. PMC 528928. PMID 15489334.
- Deaglio S, Vaisitti T, Bergui L, et al. (2005). "CD38 and CD100 lead a network of surface receptors relaying positive signals for B-CLL growth and survival". Blood 105 (8): 3042–50. doi:10.1182/blood-2004-10-3873. PMID 15613544.
- Conrotto P, Valdembri D, Corso S, et al. (2005). "Sema4D induces angiogenesis through Met recruitment by Plexin B1". Blood 105 (11): 4321–9. doi:10.1182/blood-2004-07-2885. PMID 15632204.
- Basile JR, Afkhami T, Gutkind JS (2005). "Semaphorin 4D/Plexin-B1 Induces Endothelial Cell Migration through the Activation of PYK2, Src, and the Phosphatidylinositol 3-Kinase-Akt Pathway". Mol. Cell. Biol. 25 (16): 6889–98. doi:10.1128/MCB.25.16.6889-6898.2005. PMC 1190270. PMID 16055703.
- Lewandrowski U, Moebius J, Walter U, Sickmann A (2006). "Elucidation of N-glycosylation sites on human platelet proteins: a glycoproteomic approach". Mol. Cell Proteomics 5 (2): 226–33. doi:10.1074/mcp.M500324-MCP200. PMID 16263699.
- Nkyimbeng-Takwi EH, Chapoval SP (2011). "Biology and function of neuroimmune semaphorins 4A and 4D". Immunol. Res. 50 (1): 10–21. doi:10.1007/s12026-010-8201-y. PMC 3366695. PMID 21203905.
- Smith EP, Shanks K, Lipsky MM, DeTolla LJ, Keegan AD, Chapoval SP (2011). "Expression of neuroimmune semaphorins 4A and 4D and their receptors in the lung is enhanced by allergen and vascular endothelial growth factor". BMC Immunol. 20: 30. doi:10.1186/1471-2172-12-30. PMC 3118960. PMID 21595947.
- Shanks K, Nkyimbeng-Takwi EH, Smith EP, Lipsky MM, DeTolla LJ, Keegan AD, Chapoval SP (2013). "Neuroimmune semaphorin 4D is necessary for optimal lung allergic inflammation". Mol. Immunol. 56 (4): 480–7. doi:10.1016/j.molimm.2013.05.228. PMID 23911404.
External links
- SEMA4D protein, human at the US National Library of Medicine Medical Subject Headings (MeSH)
PDB gallery
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1olz: THE LIGAND-BINDING FACE OF THE SEMAPHORINS REVEALED BY THE HIGH RESOLUTION CRYSTAL STRUCTURE OF SEMA4D
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English Journal
- Semaphorins: New Cues for Skin Healing by γδ T Cells.
- Bonneville M.SourceCentre de Recherche en Cancérologie Nantes-Angers, Université de Nantes, 44007, Nantes, France; INSERM UMR892, 44007 Nantes, France; CNRS UMR6299, 44007 Nantes, France.
- Immunity.Immunity.2012 Aug 24;37(2):194-6.
- In this issue of Immunity, Witherden et al. (2012) demonstrate a crucial role for CD100-plexin B2 interactions in the wound healing response mediated by murine γδ T cells and in the T cell morphological changes associated with this process.Copyright © 2012 Elsevier Inc. All rights reserved.
- PMID 22921116
- The CD100 Receptor Interacts with Its Plexin B2 Ligand to Regulate Epidermal γδ T Cell Function.
- Witherden DA, Watanabe M, Garijo O, Rieder SE, Sarkisyan G, Cronin SJ, Verdino P, Wilson IA, Kumanogoh A, Kikutani H, Teyton L, Fischer WH, Havran WL.SourceDepartment of Immunology and Microbial Science, The Scripps Research Institute, La Jolla, CA 92037, USA.
- Immunity.Immunity.2012 Aug 24;37(2):314-25. Epub 2012 Aug 16.
- γδ T cells respond rapidly to keratinocyte damage, providing essential contributions to the skin wound healing process. The molecular interactions regulating their response are unknown. Here, we identify a role for interaction of plexin B2 with the CD100 receptor in epithelial repair. In vitro b
- PMID 22902232
Japanese Journal
- マスト細胞機能のCD72による制御 (特集 マスト細胞活性化の関与因子)
- 知っておかなければならないアレルギー疾患の基礎的知識(7)CD72とマスト細胞活性化制御
- 「日本叩き」でCD100枚プレゼントという「韓国テレビ局」 (ワイド こんな話を聞いた)
Related Links
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Related Pictures
★リンクテーブル★
[★]
- 英
- cluster of differentiation, CD
- Bリンパ球 CD10,CD19,CD20
- Tリンパ球 CD2,CD3,CD5,CD7
- 幹細胞 CD34
- 顆粒球 CD13,CD33
- 単球 CD14:LPSをリガンドとし、Toll-like receptorと共役して細胞内シグナルを伝達する分子。
- 巨核球 CD41(GpIIb),CD42(GpIb)
- NK細胞:CD16(IgGのFc部に対する受容体)、CD56(NCAM-I)
[★]
- 同
- leucine-6, CD1A through E
種類
発現組織
- 胸腺皮質、ランゲルハンス細胞、樹状細胞、B細胞(CD1c)、腸上皮、平滑筋、血管上皮(CD1d)
分子量
機能
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[★]
- 同
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発現細胞
- B細胞やT細胞前駆体。骨髄間質細胞(bone marrow stromal cell)
分子量
機能
- Zinc metalloproteinase, marker for pre-B acute lymphatic leukemia (ALL)
別名
- Neutral endopeptidase, common acute lymphocytic leukemia antigen(CALLA)