配列タグ部位、配列標識部位
- 関
- STS
WordNet
- serve in a specific professional capacity; "the priest sat for confession"; "she sat on the jury"
- be around, often idly or without specific purpose; "The object sat in the corner"; "We sat around chatting for another hour" (同)sit around
- be seated (同)sit_down
- be in session; "When does the court of law sit?"
- be located or situated somewhere; "The White House sits on Pennsylvania Avenue"
- determine the order of constituents in; "They sequenced the human genome"
- a following of one thing after another in time; "the doctor saw a sequence of patients" (同)chronological sequence, succession, successiveness, chronological succession
- film consisting of a succession of related shots that develop a given subject in a movie (同)episode
- serial arrangement in which things follow in logical order or a recurrent pattern; "the sequence of names was alphabetical"; "he invented a technique to determine the sequence of base pairs in DNA"
- several repetitions of a melodic phrase in different keys
- arrange in a sequence
- the piece of land on which something is located (or is to be located); "a good site for the school" (同)land site
- physical position in relation to the surroundings; "the sites are determined by highly specific sequences of nucleotides" (同)situation
PrepTutorEJDIC
- (…に)『座る』,座っている《+『at』(『on, in』)+『名』》・着席する《+『down』》・(…に)〈鳥などが〉『止まる』,休む《+『on』+『名』》・〈めんどりが〉卵を抱く,巣に就く / 《場所の副詞[句]を伴って》(ある場所に)『位置する』・ (画家・写真家のために)ポーズをとる・しっとしている,動かないでいる・(議員・委員などの)職に就いている《+『on』+『名』》・〈議会・法廷などが〉開会(開廷)される・(…に)負担となる,重荷となる《+『on』(『upon』)+『名』》・〈衣服などが〉(…に)合う,似合う《+『on』+『名』》・〈人〉‘を'座らせる,着席させる《+『down』+『名,』+『名』+『down』》・〈馬〉‘に'乗る・《英》〈試験〉‘を'受ける
- 〈U〉〈C〉(時間の上の,また因果関係のつながりによる)『連続』,続き / 〈C〉《a~》(…の)一連のもの《+『of』+『名』》 / 〈U〉(起こる)『順序』(order),筋道 / 〈C〉(…に対する)結果《+『to』+『名』》
- (町・建物などの)『場所』;敷地,用地 / 遺跡;(事件などの)現場 / 〈建物など〉‘を'位置させる(locate)
- 配列,接続;(特に時間の)調整
- =ti
Wikipedia preview
出典(authority):フリー百科事典『ウィキペディア(Wikipedia)』「2015/09/20 23:05:39」(JST)
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A sequence-tagged site (or STS) is a short (200 to 500 base pair) DNA sequence that has a single occurrence in the genome and whose location and base sequence are known.
STSs can be easily detected by the polymerase chain reaction (PCR) using specific primers. For this reason they are useful for constructing genetic and physical maps from sequence data reported from many different laboratories. They serve as landmarks on the developing physical map of a genome.
When STS loci contain genetic polymorphisms (e.g. simple sequence length polymorphisms, SSLPs, single nucleotide polymorphisms), they become valuable genetic markers, i.e. loci which can be used to distinguish individuals.
They are used in shotgun sequencing, specifically to aid sequence assembly.
STSs are very helpful for detecting microdeletions in some genes. For example, some STSs can be used in screening by PCR to detect microdeletions in Azoospermia (AZF) genes in infertile men.
External links
- Sequence-Tagged Sites (STS) description on NCBI
See also
- Simple sequence length polymorphism
UpToDate Contents
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English Journal
- High frequencies of Non Allelic Homologous Recombination (NAHR) events at the AZF loci and male infertility risk in Indian men.
- Rani DS, Rajender S, Pavani K, Chaubey G, Rasalkar AA, Gupta NJ, Deendayal M, Chakravarty B, Thangaraj K.
- Scientific reports. 2019 Apr;9(1)6276.
- Deletions in the AZoospermia Factor (AZF) regions (spermatogenesis loci) on the human Y chromosome are reported as one of the most common causes of severe testiculopathy and spermatogenic defects leading to male infertility, yet not much data is available for Indian infertile men. Therefore, we scre
- PMID 31000748
- Analysis of the Yp11.2 Deletion Region of Phenotypically Normal Males with an -Null Allele in the Chinese Han Population.
- Cheng JB, Liu Q, Long F, Huang DX, Yi SH.
- Genetic testing and molecular biomarkers. 2019 Apr;().
- Array Array
- PMID 30994363
- A Reverse Genetics System for Cypovirus Based on a Bacmid Expressing T7 RNA Polymerase.
- Zhang G, Yang J, Qin F, Xu C, Wang J, Lei C, Hu J, Sun X.
- Viruses. 2019 Apr;11(4).
- Array
- PMID 30939777
Japanese Journal
- New molecular diagnostic kit to assess Y-chromosome deletions in the Japanese population
- Iijima Masashi,Koh Eitetsu,Izumi Kouji,Taya Masaki,Maeda Yuji,Kyono Kouichi,Yoshida Atsumi,Namiki Mikio
- International Journal of Urology 21(9), 910-916, 2014-09
- … Testing for these deletions in Japanese DNA samples using conventional sequence-tagged site probes occasionally lead to considerable non-specific or faint products in the Japanese population. … Methods: Sequence-tagged site probes were reselected and the Luminex suspension array assay was carried out. …
- NAID 120005478679
- ダイコンのオグラ型雄性不稔細胞質に対するRft 稔性回復遺伝子座のマッピング
- A Novel Method for the Preparation of Template DNA for PCR from Beer to Detect Materials and to Develop DNA Markers to Evaluate the Quality of Beer
- NAKAMURA Sumiko,TSUSHIMA Ryosuke,OHTSUBO Ken'ichi
- Bioscience, Biotechnology, and Biochemistry 77(4), 820-831, 2013
- … We developed suitable 7 STS (sequence-tagged site) primers related to beer quality for PCR, and it proved possible to identify 16 dominant malting barley cultivars and 22 kinds of beers. …
- NAID 130004138092
Related Links
- Sequence-Tagged Sites (STS) Introduction Sequence-Tagged Site (STS) is a relatively short, easily PCR-amplified sequence (200 to 500 bp) which can be specifically amplified by PCR and detected in the presence of all other ...
- Discussion Menu | Jfly Japanese Home Page | Jfly English Home Page STS (sequence tagged site) とは? Date: Mon, 25 Sep 95 16:30:56 JST From: ryuアットマークccyi.ccy.yamaguchi-u.ac.jp Subject: [Jfly] question ごめん下さい。
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- sequence-tagged site、STS
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- sequence-tagged site
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- 配列標識部位
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- 関
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- 関
- lie、locate、location、loci、locus、map、position、rank、seat、situated、situation、stand、topo
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- 関
- sequence
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- location、loci、locus、place、topo
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- tag