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1. 遺伝的変異の概要overview of genetic variation [show details]
…of CNVs is presented elsewhere. Short tandem repeats (STRs) are sequences of two to six base pairs that repeat in tandem and are flanked by non-repetitive sequence. Genetic variation is conferred by …
2. 遺伝学：用語集genetics glossary of terms [show details]
… single-cell RNA sequencing and exome sequencing. Barcoding also refers to methods for determining the species of origin of a DNA sample on the basis of the DNA sequence itself.… Microsatellites are also known as short tandem repeat markers (STRs) or short tandem repeat polymorphisms (STRPs).…
3. サラセミア：造血細胞移植後のマネージメントthalassemia management after hematopoietic cell transplantation [show details]
… remains the gold standard and MRI may be a reasonable alternative as long as local calibration and R2 sequences are used . In our experience, the risk of bleeding is 0.5 percent without ultrasound guidance and … polymorphisms in DNA microsatellites (also called short tandem repeats [STRs]) using polymerase chain reaction (PCR) amplification;…
4. ミュアト－ル症候群muir torre syndrome [show details]
…instability (MSI) is the hallmark of MMR gene deficiency. Microsatellites are short repetitive DNA sequences, typically mononucleotide or dinucleotide tandem repeats, that are susceptible to mutations during …
5. 薬理ゲノム学の概要overview of pharmacogenomics [show details]
…various components of the genome on response to a drug. Among the most commonly studied are genetic sequence variants, structural changes in chromosomes (eg, translocations), epigenetic variants (eg, changes … percent. Other forms of variation include insertions, deletions, copy number variants, and short tandem repeats. Variants that are seen at much lower prevalence than 1 percent of the population are often …

「SINE」

　　[★]

日: 短い散在反復配列、短分散型核内反復配列、短い散在性反復配列
英: short interspersed element, short interspersed nuclear element, short interspersed nucleotide element, SINEs
関: レトロトランスポゾン

quoted from http://en.wikipedia.org/wiki/Long_interspersed_nucleotide_elements#SINEs

Short interspersed repetitive elements or Short interspersed nuclear elements[8] are short DNA sequences (<500 bases) that represent reverse-transcribed RNA molecules originally transcribed by RNA polymerase III into tRNA, rRNA, and other small nuclear RNAs. SINEs do not encode a functional reverse transcriptase protein and rely on other mobile elements for transposition. The most common SINEs in primates are called Alu sequences. Alu elements are 280 base pairs long, do not contain any coding sequences, and can be recognized by the restriction enzyme AluI (hence the name). With about 1,500,000 copies, SINEs make up about 13% of the human genome.[11] While historically viewed as "junk DNA", recent research suggests that in some rare cases both LINEs and SINEs were incorporated into novel genes, so as to evolve new functionality. The distribution of these elements has been implicated in some genetic diseases and cancers.

「short interspersed nucleotide element」

　　[★]

短鎖散在反復配列、短分散型核内反復配列、短い散在反復配列、短い散在性反復配列

関: short interspersed element、short interspersed nuclear element、SINE

「短鎖散在反復配列」

　　[★]

英: short interspersed nucleotide element
関: 短分散型核内反復配列、短い散在反復配列、短い散在性反復配列

「配列」

　　[★]

英: sequence、arrangement、array、constellation、arrange、sequential
関: 協定、経時的、系列、結果、シークエンス、シーケンス、順序、準備、筋道、整列、取り計らう、配置、配列決定、連続、連続的、逐次、結果としての、時系列、並べる、アレイ、順次、整理

PHP関数

array_unique()

	for ( $i = 0 ; $i < 5 ; $i++ ) {
		$a['w'][$i] = $i+100;
		$a['m'][$i] = 1;
	}
	for ( $i = 5 ; $i < 15 ; $i++ ) {
		$a['w'][$i] = $i+100;
		$a['m'][$i] = 2;
	}
	for ( $i = 15 ; $i < 20 ; $i++ ) {
		$a['w'][$i] = $i+100;
		$a['m'][$i] = 3;
	}

	$a['w'][5]=100;
	$a['w'][15]=100;

var_dump($a);
	$b = array_unique($a['w']); #配列 重複キー 消去

var_dump($b);

-----
array(2) { 
	["w"]=> array(20) 
		{
			[0]=> int(100) [1]=> int(101) [2]=> int(102) [3]=> int(103) [4]=> int(104) [5]=> int(100) [6]=> int(106) [7]=> int(107) [8]=> int(108) [9]=> int(109) [10]=> int(110) [11]=> int(111) [12]=> int(112) [13]=> int(113) [14]=> int(114) [15]=> int(100) [16]=> int(116) [17]=> int(117) [18]=> int(118) [19]=> int(119) } 
	["m"]=> array(20) 
		{
			[0]=> int(1) [1]=> int(1) [2]=> int(1) [3]=> int(1) [4]=> int(1) [5]=> int(2) [6]=> int(2) [7]=> int(2) [8]=> int(2) [9]=> int(2) [10]=> int(2) [11]=> int(2) [12]=> int(2) [13]=> int(2) [14]=> int(2) [15]=> int(3) [16]=> int(3) [17]=> int(3) [18]=> int(3) [19]=> int(3) } } 

array(18) {
			[0]=> int(100) [1]=> int(101) [2]=> int(102) [3]=> int(103) [4]=> int(104) [6]=> int(106) [7]=> int(107) [8]=> int(108) [9]=> int(109) [10]=> int(110) [11]=> int(111) [12]=> int(112) [13]=> int(113) [14]=> int(114) [16]=> int(116) [17]=> int(117) [18]=> int(118) [19]=> int(119) }

配列の要素の除去

array_pop

配列のインデックスから、末尾にあるインデックス１つを取り除く。指定した変数の配列が空だった場合には、null が帰される。

配列の結合

1. +演算子。同じキーを上書きする。
2. array_push(array, array)とすると、出力が array([0]->array, [1]->array)になる。
3. array_match(out_array, add_array)これでokだが、add_array = array();だとエラーが起こるので、適当なトラップが必要。　←　array_mergeの間違えでしょ？

配列要素の結合

implodeを用いる

$str = implode('/',$array);

配列の要素表示

var_dump()
print_r();

「散在」

　　[★]

英: dissemination、disseminate、intersperse、dispersed、interspersed
関: 散らばった、転移、播種、汎発、分散、分散型、内転移

「散在性」

　　[★]

英: diffuse、disseminated、diffusely
関: 拡散、拡散性、広汎性、播種性、汎発性、びまん性、瀰漫性

「短い」

　　[★]

英: short、brief、brevis
関: 乏しい、短期、不足、要約、しばらく、省略された、短時間

「反復配列」

　　[★]

英: repetitive sequence, repeated sequence
同: 繰返し配列、繰り返し配列

リンク元	「SINE」「short interspersed nucleotide element」「短鎖散在反復配列」
関連記事	「配列」「散在」「散在性」「短い」「反復配列」

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「SINE」

「short interspersed nucleotide element」

「短鎖散在反復配列」

「配列」

PHP関数

array_unique()

配列の要素の除去

array_pop

配列の結合

配列要素の結合

配列の要素表示

「散在」

「散在性」

「短い」

「反復配列」