Proliferating cell nuclear antigen |
The assembled human DNA clamp, a trimer of the protein PCNA. |
Available structures |
PDB |
Ortholog search: PDBe, RCSB |
List of PDB id codes |
1AXC, 1U76, 1U7B, 1UL1, 1VYJ, 1VYM, 1W60, 2ZVK, 2ZVL, 2ZVM, 3P87, 3TBL, 3VKX
|
|
|
Identifiers |
Symbols |
PCNA; MGC8367 |
External IDs |
OMIM: 176740 MGI: 97503 HomoloGene: 1945 GeneCards: PCNA Gene |
Gene Ontology |
Molecular function |
• purine-specific mismatch base pair DNA N-glycosylase activity
• protein binding
• DNA polymerase processivity factor activity
• receptor tyrosine kinase binding
• dinucleotide insertion or deletion binding
• MutLalpha complex binding
• identical protein binding
|
Cellular component |
• nucleus
• nucleoplasm
• DNA replication factor C complex
• nucleolus
• cytoplasm
• microtubule cytoskeleton
• nuclear replication fork
• PCNA complex
• PCNA-p21 complex
|
Biological process |
• G1/S transition of mitotic cell cycle
• regulation of transcription involved in G1/S phase of mitotic cell cycle
• S phase of mitotic cell cycle
• mitotic cell cycle
• telomere maintenance via recombination
• telomere maintenance
• DNA replication
• DNA strand elongation involved in DNA replication
• regulation of DNA replication
• DNA repair
• transcription-coupled nucleotide-excision repair
• base-excision repair
• nucleotide-excision repair
• nucleotide-excision repair, DNA gap filling
• mismatch repair
• heart development
• cell proliferation
• translesion synthesis
• positive regulation of deoxyribonuclease activity
• telomere maintenance via semi-conservative replication
• response to lipid
• response to cadmium ion
• phosphatidylinositol-mediated signaling
|
Sources: Amigo / QuickGO |
|
RNA expression pattern |
|
More reference expression data |
Orthologs |
Species |
Human |
Mouse |
|
Entrez |
5111 |
18538 |
|
Ensembl |
ENSG00000132646 |
ENSMUSG00000027342 |
|
UniProt |
P12004 |
P17918 |
|
RefSeq (mRNA) |
NM_002592 |
NM_011045 |
|
RefSeq (protein) |
NP_002583 |
NP_035175 |
|
Location (UCSC) |
Chr 20:
5.1 – 5.11 Mb |
Chr 2:
132.25 – 132.25 Mb |
|
PubMed search |
[1] |
[2] |
|
|
Proliferating Cell Nuclear Antigen, commonly known as PCNA, is a protein that acts as a processivity factor for DNA polymerase ε in eukaryotic cells. It achieves this processivity by encircling the DNA, thus creating a topological link to the genome. It is an example of a DNA clamp.
The protein encoded by this gene is found in the nucleus and is a cofactor of DNA polymerase delta. The encoded protein acts as a homotrimer and helps increase the processivity of leading strand synthesis during DNA replication. In response to DNA damage, this protein is ubiquitinated and is involved in the RAD6-dependent DNA repair pathway. Two transcript variants encoding the same protein have been found for this gene. Pseudogenes of this gene have been described on chromosome 4 and on the X chromosome.[1]
Contents
- 1 Expression in the nucleus during DNA synthesis
- 2 Role in DNA repair
- 3 PCNA-binding proteins
- 4 Interactions
- 5 Uses
- 6 See also
- 7 External links
- 8 References
- 9 Further reading
Expression in the nucleus during DNA synthesis[edit]
PCNA was originally identified as an antigen that is expressed in the nuclei of cells during the DNA synthesis phase of the cell cycle.[2] Part of the protein was sequenced and that sequence was used to allow isolation of a cDNA clone.[3] PCNA helps hold DNA polymerase epsilon (Pol ε) to DNA. PCNA is clamped[4] to DNA through the action of replication factor C (RFC),[5] which is a heteropentameric member of the AAA+ class of ATPases. Expression of PCNA is under the control of E2F transcription factor-containing complexes.[6]
Role in DNA repair[edit]
Since DNA polymerase epsilon is involved in resynthesis of excised damaged DNA strands during DNA repair, PCNA is important for both DNA synthesis and DNA repair.[7][8]
PCNA is also involved in the DNA damage tolerance pathway known as post-replication repair (PRR).[9] In PRR, there are two sub-pathways: (1) a translesion pathway, which is carried out by specialised DNA polymerases that are able to incorporate damaged DNA bases into their active sites (unlike the normal replicative polymerase, which stall), and hence bypass the damage, and (2) a proposed "template switch" pathway that is thought to involve damage bypass by recruitment of the homologous recombination machinery. PCNA is pivotal to the activation of these pathways and the choice as to which pathway is utilised by the cell. PCNA becomes post-translationally modified by ubiquitin.[10] Mono-ubiquitin of lysine number 164 on PCNA activates the translesion synthesis pathway. Extension of this mono-ubiquitin by a non-canonical lysine-63-linked poly-ubiquitin chain on PCNA[10] is thought to activate the template switch pathway. Furthermore, sumoylation (by small ubiquitin-like modifier, SUMO) of PCNA lysine-164 (and to a lesser extent, lysine-127) inhibits the template switch pathway.[10] This antagonistic effect occurs because sumoylated PCNA recruits a DNA helicase called Srs2,[11] which has a role in disrupting Rad51 nucleoprotein filaments fundamental for initiation of homologous recombination.
PCNA-binding proteins[edit]
• TCP protein domain • NKp44 Receptor, DNA polymerases • Clamp loader • Flap endonuclease • DNA ligase • Topoisomerase • Replication licensing factor • E3 ubiquitin ligases • E2 SUMO-conjugating enzyme • Helicases, ATPases • Mismatch repair enzymes • Base excision repair enzymes • Nucleotide excision repair enzyme • Poly ADP ribose polymerase • Histone chaperone • Chromatin remodeling factor • Histone acetyltransferase • Histone deacetyltransferase • DNA methyltransferase • Sister-chromatid cohesion factors • Protein kinases • Cell-cycle regulators • Apoptotic factors
for details see[12]
Interactions[edit]
PCNA has been shown to interact with Ku70,[13][14] MSH3,[13][15][16] Werner syndrome ATP-dependent helicase,[17][18] RFC2,[13][19][20] RFC3,[13][21] RFC1,[13][22][23][24][25] RFC4,[13][19] RFC5,[13][19][24] GADD45G,[26][27] CDC25C,[28] MUTYH,[29] Flap structure-specific endonuclease 1,[30][31][32][33][34][35][36] Cyclin O,[13][37] CHTF18,[13] Y box binding protein 1,[38] Cyclin D1,[39][40] Annexin A2,[13] MSH6,[13][15][16] DNMT1,[41][42][43] HDAC1,[44] KCTD13,[45] XRCC1,[46] Cyclin-dependent kinase 4,[40][47] Ku80,[13][14][48] HUS1,[49] GADD45A,[50][51][52][53][54] POLD2,[55] ING1,[56] POLH,[57] KIAA0101,[36] POLDIP2,[58] EP300,[59] MCL1,[60] POLD3,[13][61] Cyclin-dependent kinase inhibitor 1C,[62] POLL,[63][64][65] Ubiquitin C[66][67][68] and P21.[23][32][36][62][69][70][71][72]
Uses[edit]
Antibodies against proliferating cell nuclear antigen (PCNA) or monoclonal antibody termed Ki-67 can be used for grading of different neoplasms, e.g. astrocytoma. They can be of diagnostic and prognostic value.
See also[edit]
- Transcription
- Ki-67 - cellular marker for proliferation
External links[edit]
- PCNA at the US National Library of Medicine Medical Subject Headings (MeSH)
- "ANA: Cell cycle related (Mitotic): PCNA type 1 and type 2 Antibody Patterns". Antibody Patterns.com. Retrieved 2008-04-15.
- Dan Krotz. "Structure of a clamp–loader complex". Advanced Light Source News. Lawrence Berkeley National Laboratory. Retrieved 2008-04-15. [4]
- "Movie showing a model of clamp loading of PCNA onto DNA". Pubmed Central. [73]
References[edit]
- ^ "Entrez Gene: PCNA proliferating cell nuclear antigen".
- ^ Leonardi E, Girlando S, Serio G, Mauri FA, Perrone G, Scampini S, Dalla Palma P, Barbareschi M (1992). "PCNA and Ki67 expression in breast carcinoma: correlations with clinical and biological variables". J. Clin. Pathol. 45 (5): 416–419. doi:10.1136/jcp.45.5.416. PMC 495304. PMID 1350788.
- ^ Matsumoto K, Moriuchi T, Koji T, Nakane PK (1987). "Molecular cloning of cDNA coding for rat proliferating cell nuclear antigen (PCNA)/cyclin". EMBO J. 6 (3): 637–42. PMC 553445. PMID 2884104.
- ^ a b Bowman GD, O'Donnell M, Kuriyan J (2004). "Structural analysis of a eukaryotic sliding DNA clamp-clamp loader complex". Nature 429 (6993): 724–730. doi:10.1038/nature02585. PMID 15201901.
- ^ Zhang G, Gibbs E, Kelman Z, O'Donnell M, Hurwitz J (1999). "Studies on the interactions between human replication factor C and human proliferating cell nuclear antigen". Proc. Natl. Acad. Sci. U.S.A. 96 (5): 1869–1874. doi:10.1073/pnas.96.5.1869. PMC 26703. PMID 10051561.
- ^ Egelkrout EM, Mariconti L, Settlage SB, Cella R, Robertson D, Hanley-Bowdoin L (2002). "Two E2F elements regulate the proliferating cell nuclear antigen promoter differently during leaf development". Plant Cell 14 (12): 3225–3236. doi:10.1105/tpc.006403. PMC 151214. PMID 12468739.
- ^ Shivji KK, Kenny MK, Wood RD (April 1992). "Proliferating cell nuclear antigen is required for DNA excision repair". Cell 69 (2): 367–74. doi:10.1016/0092-8674(92)90416-A. PMID 1348971.
- ^ Essers J, Theil AF, Baldeyron C, van Cappellen WA, Houtsmuller AB, Kanaar R, Vermeulen W (2005). "Nuclear dynamics of PCNA in DNA replication and repair". Mol. Cell. Biol. 25 (21): 9350–9359. doi:10.1128/MCB.25.21.9350-9359.2005. PMC 1265825. PMID 16227586.
- ^ Lehmann AR, Fuchs RP (December 2006). "Gaps and forks in DNA replication: Rediscovering old models". DNA Repair (Amst.) 5 (12): 1495–1498. doi:10.1016/j.dnarep.2006.07.002. PMID 16956796.
- ^ a b c Hoege C, Pfander B, Moldovan GL, Pyrowolakis G, Jentsch S (September 2002). "RAD6-dependent DNA repair is linked to modification of PCNA by ubiquitin and SUMO". Nature 419 (6903): 135–141. doi:10.1038/nature00991. PMID 12226657.
- ^ Pfander B, Moldovan GL, Sacher M, Hoege C, Jentsch S (July 2005). "SUMO-modified PCNA recruits Srs2 to prevent recombination during S phase". Nature 436 (7049): 428–33. doi:10.1038/nature03665. PMID 15931174.
- ^ Moldovan GL, Pfander B, Jentsch S (2007). "PCNA, the maestro of the replication fork". Cell 129 (4): 665–679. doi:10.1016/j.cell.2007.05.003. PMID 17512402.
- ^ a b c d e f g h i j k l m Ohta, Satoshi; Shiomi Yasushi, Sugimoto Katsunori, Obuse Chikashi, Tsurimoto Toshiki (October 2002). "A proteomics approach to identify proliferating cell nuclear antigen (PCNA)-binding proteins in human cell lysates. Identification of the human CHL12/RFCs2-5 complex as a novel PCNA-binding protein". J. Biol. Chem. (United States) 277 (43): 40362–40367. doi:10.1074/jbc.M206194200. ISSN 0021-9258. PMID 12171929.
- ^ a b Balajee, A S; Geard C R (March 2001). "Chromatin-bound PCNA complex formation triggered by DNA damage occurs independent of the ATM gene product in human cells". Nucleic Acids Res. (England) 29 (6): 1341–1351. doi:10.1093/nar/29.6.1341. PMC 29758. PMID 11239001.
- ^ a b Kleczkowska, H E; Marra G, Lettieri T, Jiricny J (March 2001). "hMSH3 and hMSH6 interact with PCNA and colocalize with it to replication foci". Genes Dev. (United States) 15 (6): 724–736. doi:10.1101/gad.191201. ISSN 0890-9369. PMC 312660. PMID 11274057.
- ^ a b Clark, A B; Valle F, Drotschmann K, Gary R K, Kunkel T A (November 2000). "Functional interaction of proliferating cell nuclear antigen with MSH2-MSH6 and MSH2-MSH3 complexes". J. Biol. Chem. (UNITED STATES) 275 (47): 36498–36501. doi:10.1074/jbc.C000513200. ISSN 0021-9258. PMID 11005803.
- ^ Rodríguez-López, Ana M; Jackson Dean A, Nehlin Jan O, Iborra Francisco, Warren Anna V, Cox Lynne S (February 2003). "Characterisation of the interaction between WRN, the helicase/exonuclease defective in progeroid Werner's syndrome, and an essential replication factor, PCNA". Mech. Ageing Dev. (Ireland) 124 (2): 167–174. doi:10.1016/S0047-6374(02)00131-8. ISSN 0047-6374. PMID 12633936.
- ^ Huang, S; Beresten S, Li B, Oshima J, Ellis N A, Campisi J (June 2000). "Characterization of the human and mouse WRN 3'-->5' exonuclease". Nucleic Acids Res. (ENGLAND) 28 (12): 2396–2405. doi:10.1093/nar/28.12.2396. PMC 102739. PMID 10871373.
- ^ a b c Cai, J; Gibbs E, Uhlmann F, Phillips B, Yao N, O'Donnell M, Hurwitz J (July 1997). "A complex consisting of human replication factor C p40, p37, and p36 subunits is a DNA-dependent ATPase and an intermediate in the assembly of the holoenzyme". J. Biol. Chem. (UNITED STATES) 272 (30): 18974–18981. doi:10.1074/jbc.272.30.18974. ISSN 0021-9258. PMID 9228079.
- ^ Pan, Z Q; Chen M, Hurwitz J (January 1993). "The subunits of activator 1 (replication factor C) carry out multiple functions essential for proliferating-cell nuclear antigen-dependent DNA synthesis". Proc. Natl. Acad. Sci. U.S.A. (UNITED STATES) 90 (1): 6–10. doi:10.1073/pnas.90.1.6. ISSN 0027-8424. PMC 45588. PMID 8093561.
- ^ Merkle, Carolin J; Karnitz Larry M, Henry-Sánchez John T, Chen Junjie (August 2003). "Cloning and characterization of hCTF18, hCTF8, and hDCC1. Human homologs of a Saccharomyces cerevisiae complex involved in sister chromatid cohesion establishment". J. Biol. Chem. (United States) 278 (32): 30051–30056. doi:10.1074/jbc.M211591200. ISSN 0021-9258. PMID 12766176.
- ^ Maruyama, Tetsuo; Farina Andrea, Dey Anup, Cheong JaeHun, Bermudez Vladimir P, Tamura Tomohiko, Sciortino Selvaggia, Shuman Jon, Hurwitz Jerard, Ozato Keiko (September 2002). "A Mammalian bromodomain protein, brd4, interacts with replication factor C and inhibits progression to S phase". Mol. Cell. Biol. (United States) 22 (18): 6509–6520. doi:10.1128/MCB.22.18.6509-6520.2002. ISSN 0270-7306. PMC 135621. PMID 12192049.
- ^ a b Fotedar, R; Mossi R, Fitzgerald P, Rousselle T, Maga G, Brickner H, Messier H, Kasibhatla S, Hübscher U, Fotedar A (August 1996). "A conserved domain of the large subunit of replication factor C binds PCNA and acts like a dominant negative inhibitor of DNA replication in mammalian cells". EMBO J. (ENGLAND) 15 (16): 4423–33. ISSN 0261-4189. PMC 452166. PMID 8861969.
- ^ a b Mossi, R; Jónsson Z O, Allen B L, Hardin S H, Hübscher U (January 1997). "Replication factor C interacts with the C-terminal side of proliferating cell nuclear antigen". J. Biol. Chem. (UNITED STATES) 272 (3): 1769–1776. doi:10.1074/jbc.272.3.1769. ISSN 0021-9258. PMID 8999859.
- ^ van der Kuip, H; Carius B, Haque S J, Williams B R, Huber C, Fischer T (April 1999). "The DNA-binding subunit p140 of replication factor C is upregulated in cycling cells and associates with G1 phase cell cycle regulatory proteins". J. Mol. Med. (GERMANY) 77 (4): 386–392. doi:10.1007/s001090050365. ISSN 0946-2716. PMID 10353443.
- ^ Azam, N; Vairapandi M, Zhang W, Hoffman B, Liebermann D A (January 2001). "Interaction of CR6 (GADD45gamma ) with proliferating cell nuclear antigen impedes negative growth control". J. Biol. Chem. (United States) 276 (4): 2766–2774. doi:10.1074/jbc.M005626200. ISSN 0021-9258. PMID 11022036.
- ^ Nakayama, K; Hara T, Hibi M, Hirano T, Miyajima A (August 1999). "A novel oncostatin M-inducible gene OIG37 forms a gene family with MyD118 and GADD45 and negatively regulates cell growth". J. Biol. Chem. (UNITED STATES) 274 (35): 24766–24772. doi:10.1074/jbc.274.35.24766. ISSN 0021-9258. PMID 10455148.
- ^ Kawabe, Takumi; Suganuma Masashi, Ando Tomoaki, Kimura Mayumi, Hori Haruna, Okamoto Takashi (March 2002). "Cdc25C interacts with PCNA at G2/M transition". Oncogene (England) 21 (11): 1717–1726. doi:10.1038/sj.onc.1205229. ISSN 0950-9232. PMID 11896603.
- ^ Parker, A; Gu Y, Mahoney W, Lee S H, Singh K K, Lu A L (February 2001). "Human homolog of the MutY repair protein (hMYH) physically interacts with proteins involved in long patch DNA base excision repair". J. Biol. Chem. (United States) 276 (8): 5547–5555. doi:10.1074/jbc.M008463200. ISSN 0021-9258. PMID 11092888.
- ^ Henneke, Ghislaine; Koundrioukoff Stéphane, Hübscher Ulrich (July 2003). "Phosphorylation of human Fen1 by cyclin-dependent kinase modulates its role in replication fork regulation". Oncogene (England) 22 (28): 4301–4313. doi:10.1038/sj.onc.1206606. ISSN 0950-9232. PMID 12853968.
- ^ Hasan, S; Stucki M, Hassa P O, Imhof R, Gehrig P, Hunziker P, Hübscher U, Hottiger M O (June 2001). "Regulation of human flap endonuclease-1 activity by acetylation through the transcriptional coactivator p300". Mol. Cell (United States) 7 (6): 1221–1231. doi:10.1016/S1097-2765(01)00272-6. ISSN 1097-2765. PMID 11430825.
- ^ a b Jónsson, Z O; Hindges R, Hübscher U (April 1998). "Regulation of DNA replication and repair proteins through interaction with the front side of proliferating cell nuclear antigen". EMBO J. (ENGLAND) 17 (8): 2412–2425. doi:10.1093/emboj/17.8.2412. ISSN 0261-4189. PMC 1170584. PMID 9545252.
- ^ Gary, R; Ludwig D L, Cornelius H L, MacInnes M A, Park M S (September 1997). "The DNA repair endonuclease XPG binds to proliferating cell nuclear antigen (PCNA) and shares sequence elements with the PCNA-binding regions of FEN-1 and cyclin-dependent kinase inhibitor p21". J. Biol. Chem. (UNITED STATES) 272 (39): 24522–24529. doi:10.1074/jbc.272.39.24522. ISSN 0021-9258. PMID 9305916.
- ^ Chen, U; Chen S, Saha P, Dutta A (October 1996). "p21Cip1/Waf1 disrupts the recruitment of human Fen1 by proliferating-cell nuclear antigen into the DNA replication complex". Proc. Natl. Acad. Sci. U.S.A. (UNITED STATES) 93 (21): 11597–11602. doi:10.1073/pnas.93.21.11597. ISSN 0027-8424. PMC 38103. PMID 8876181.
- ^ Dianova, I I; Bohr V A, Dianov G L (October 2001). "Interaction of human AP endonuclease 1 with flap endonuclease 1 and proliferating cell nuclear antigen involved in long-patch base excision repair". Biochemistry (United States) 40 (42): 12639–12644. doi:10.1021/bi011117i. ISSN 0006-2960. PMID 11601988.
- ^ a b c Yu, P; Huang B, Shen M, Lau C, Chan E, Michel J, Xiong Y, Payan D G, Luo Y (January 2001). "p15(PAF), a novel PCNA associated factor with increased expression in tumor tissues". Oncogene (England) 20 (4): 484–489. doi:10.1038/sj.onc.1204113. ISSN 0950-9232. PMID 11313979.
- ^ Otterlei, M; Warbrick E, Nagelhus T A, Haug T, Slupphaug G, Akbari M, Aas P A, Steinsbekk K, Bakke O, Krokan H E (July 1999). "Post-replicative base excision repair in replication foci". EMBO J. (ENGLAND) 18 (13): 3834–3844. doi:10.1093/emboj/18.13.3834. ISSN 0261-4189. PMC 1171460. PMID 10393198.
- ^ Ise, T; Nagatani G, Imamura T, Kato K, Takano H, Nomoto M, Izumi H, Ohmori H, Okamoto T, Ohga T, Uchiumi T, Kuwano M, Kohno K (January 1999). "Transcription factor Y-box binding protein 1 binds preferentially to cisplatin-modified DNA and interacts with proliferating cell nuclear antigen". Cancer Res. (UNITED STATES) 59 (2): 342–6. ISSN 0008-5472. PMID 9927044.
- ^ Matsuoka, S; Yamaguchi M, Matsukage A (April 1994). "D-type cyclin-binding regions of proliferating cell nuclear antigen". J. Biol. Chem. (UNITED STATES) 269 (15): 11030–6. ISSN 0021-9258. PMID 7908906.
- ^ a b Xiong, Y; Zhang H, Beach D (August 1993). "Subunit rearrangement of the cyclin-dependent kinases is associated with cellular transformation". Genes Dev. (UNITED STATES) 7 (8): 1572–1583. doi:10.1101/gad.7.8.1572. ISSN 0890-9369. PMID 8101826.
- ^ Rountree, M R; Bachman K E, Baylin S B (July 2000). "DNMT1 binds HDAC2 and a new co-repressor, DMAP1, to form a complex at replication foci". Nat. Genet. (UNITED STATES) 25 (3): 269–277. doi:10.1038/77023. ISSN 1061-4036. PMID 10888872.
- ^ Iida, Tetsuo; Suetake Isao, Tajima Shoji, Morioka Hiroshi, Ohta Satoshi, Obuse Chikashi, Tsurimoto Toshiki (October 2002). "PCNA clamp facilitates action of DNA cytosine methyltransferase 1 on hemimethylated DNA". Genes Cells (England) 7 (10): 997–1007. doi:10.1046/j.1365-2443.2002.00584.x. ISSN 1356-9597. PMID 12354094.
- ^ Chuang, L S; Ian H I, Koh T W, Ng H H, Xu G, Li B F (September 1997). "Human DNA-(cytosine-5) methyltransferase-PCNA complex as a target for p21WAF1". Science (UNITED STATES) 277 (5334): 1996–2000. doi:10.1126/science.277.5334.1996. ISSN 0036-8075. PMID 9302295.
- ^ Milutinovic, Snezana; Zhuang Qianli, Szyf Moshe (June 2002). "Proliferating cell nuclear antigen associates with histone deacetylase activity, integrating DNA replication and chromatin modification". J. Biol. Chem. (United States) 277 (23): 20974–20978. doi:10.1074/jbc.M202504200. ISSN 0021-9258. PMID 11929879.
- ^ He, H; Tan C K, Downey K M, So A G (October 2001). "A tumor necrosis factor alpha- and interleukin 6-inducible protein that interacts with the small subunit of DNA polymerase delta and proliferating cell nuclear antigen". Proc. Natl. Acad. Sci. U.S.A. (United States) 98 (21): 11979–11984. doi:10.1073/pnas.221452098. ISSN 0027-8424. PMC 59753. PMID 11593007.
- ^ Fan, Jinshui; Otterlei Marit, Wong Heng-Kuan, Tomkinson Alan E, Wilson David M (2004). "XRCC1 co-localizes and physically interacts with PCNA". Nucleic Acids Res. (England) 32 (7): 2193–2201. doi:10.1093/nar/gkh556. PMC 407833. PMID 15107487.
- ^ Serrano, M; Hannon G J, Beach D (December 1993). "A new regulatory motif in cell-cycle control causing specific inhibition of cyclin D/CDK4". Nature (ENGLAND) 366 (6456): 704–707. doi:10.1038/366704a0. ISSN 0028-0836. PMID 8259215.
- ^ Matheos, Diamanto; Ruiz Marcia T, Price Gerald B, Zannis-Hadjopoulos Maria (October 2002). "Ku antigen, an origin-specific binding protein that associates with replication proteins, is required for mammalian DNA replication". Biochim. Biophys. Acta (Netherlands) 1578 (1–3): 59–72. doi:10.1016/S0167-4781(02)00497-9. ISSN 0006-3002. PMID 12393188.
- ^ Komatsu, K; Wharton W, Hang H, Wu C, Singh S, Lieberman H B, Pledger W J, Wang H G (November 2000). "PCNA interacts with hHus1/hRad9 in response to DNA damage and replication inhibition". Oncogene (ENGLAND) 19 (46): 5291–5297. doi:10.1038/sj.onc.1203901. ISSN 0950-9232. PMID 11077446.
- ^ Smith, M L; Chen I T, Zhan Q, Bae I, Chen C Y, Gilmer T M, Kastan M B, O'Connor P M, Fornace A J (November 1994). "Interaction of the p53-regulated protein Gadd45 with proliferating cell nuclear antigen". Science (UNITED STATES) 266 (5189): 1376–1380. doi:10.1126/science.7973727. ISSN 0036-8075. PMID 7973727.
- ^ Chen, I T; Smith M L, O'Connor P M, Fornace A J (November 1995). "Direct interaction of Gadd45 with PCNA and evidence for competitive interaction of Gadd45 and p21Waf1/Cip1 with PCNA". Oncogene (ENGLAND) 11 (10): 1931–7. ISSN 0950-9232. PMID 7478510.
- ^ Vairapandi, M; Azam N, Balliet A G, Hoffman B, Liebermann D A (June 2000). "Characterization of MyD118, Gadd45, and proliferating cell nuclear antigen (PCNA) interacting domains. PCNA impedes MyD118 AND Gadd45-mediated negative growth control". J. Biol. Chem. (UNITED STATES) 275 (22): 16810–16819. doi:10.1074/jbc.275.22.16810. ISSN 0021-9258. PMID 10828065.
- ^ Hall, P A; Kearsey J M, Coates P J, Norman D G, Warbrick E, Cox L S (June 1995). "Characterisation of the interaction between PCNA and Gadd45". Oncogene (ENGLAND) 10 (12): 2427–33. ISSN 0950-9232. PMID 7784094.
- ^ Yang, Q; Manicone A, Coursen J D, Linke S P, Nagashima M, Forgues M, Wang X W (November 2000). "Identification of a functional domain in a GADD45-mediated G2/M checkpoint". J. Biol. Chem. (UNITED STATES) 275 (47): 36892–36898. doi:10.1074/jbc.M005319200. ISSN 0021-9258. PMID 10973963.
- ^ Lu, Xiaoqing; Tan Cheng-Keat, Zhou Jin-Qiu, You Min, Carastro L Michael, Downey Kathleen M, So Antero G (July 2002). "Direct interaction of proliferating cell nuclear antigen with the small subunit of DNA polymerase delta". J. Biol. Chem. (United States) 277 (27): 24340–24345. doi:10.1074/jbc.M200065200. ISSN 0021-9258. PMID 11986310.
- ^ Scott, M; Bonnefin P, Vieyra D, Boisvert F M, Young D, Bazett-Jones D P, Riabowol K (October 2001). "UV-induced binding of ING1 to PCNA regulates the induction of apoptosis". J. Cell. Sci. (England) 114 (Pt 19): 3455–62. ISSN 0021-9533. PMID 11682605.
- ^ Haracska, L; Johnson R E, Unk I, Phillips B, Hurwitz J, Prakash L, Prakash S (November 2001). "Physical and functional interactions of human DNA polymerase eta with PCNA". Mol. Cell. Biol. (United States) 21 (21): 7199–7206. doi:10.1128/MCB.21.21.7199-7206.2001. ISSN 0270-7306. PMC 99895. PMID 11585903.
- ^ Liu, Li; Rodriguez-Belmonte Esther M, Mazloum Nayef, Xie Bin, Lee Marietta Y W T (March 2003). "Identification of a novel protein, PDIP38, that interacts with the p50 subunit of DNA polymerase delta and proliferating cell nuclear antigen". J. Biol. Chem. (United States) 278 (12): 10041–10047. doi:10.1074/jbc.M208694200. ISSN 0021-9258. PMID 12522211.
- ^ Hasan, S; Hassa P O, Imhof R, Hottiger M O (March 2001). "Transcription coactivator p300 binds PCNA and may have a role in DNA repair synthesis". Nature (England) 410 (6826): 387–391. doi:10.1038/35066610. ISSN 0028-0836. PMID 11268218.
- ^ Fujise, K; Zhang D, Liu J, Yeh E T (December 2000). "Regulation of apoptosis and cell cycle progression by MCL1. Differential role of proliferating cell nuclear antigen". J. Biol. Chem. (UNITED STATES) 275 (50): 39458–39465. doi:10.1074/jbc.M006626200. ISSN 0021-9258. PMID 10978339.
- ^ Ducoux, M; Urbach S, Baldacci G, Hübscher U, Koundrioukoff S, Christensen J, Hughes P (December 2001). "Mediation of proliferating cell nuclear antigen (PCNA)-dependent DNA replication through a conserved p21(Cip1)-like PCNA-binding motif present in the third subunit of human DNA polymerase delta". J. Biol. Chem. (United States) 276 (52): 49258–49266. doi:10.1074/jbc.M106990200. ISSN 0021-9258. PMID 11595739.
- ^ a b Watanabe, H; Pan Z Q, Schreiber-Agus N, DePinho R A, Hurwitz J, Xiong Y (February 1998). "Suppression of cell transformation by the cyclin-dependent kinase inhibitor p57KIP2 requires binding to proliferating cell nuclear antigen". Proc. Natl. Acad. Sci. U.S.A. (UNITED STATES) 95 (4): 1392–1397. doi:10.1073/pnas.95.4.1392. ISSN 0027-8424. PMC 19016. PMID 9465025.
- ^ Haracska, Lajos; Unk Ildiko, Johnson Robert E, Phillips Barbara B, Hurwitz Jerard, Prakash Louise, Prakash Satya (February 2002). "Stimulation of DNA synthesis activity of human DNA polymerase kappa by PCNA". Mol. Cell. Biol. (United States) 22 (3): 784–791. doi:10.1128/MCB.22.3.784-791.2002. ISSN 0270-7306. PMC 133560. PMID 11784855.
- ^ Maga, Giovanni; Villani Giuseppe, Ramadan Kristijan, Shevelev Igor, Tanguy Le Gac Nicolas, Blanco Luis, Blanca Giuseppina, Spadari Silvio, Hübscher Ulrich (December 2002). "Human DNA polymerase lambda functionally and physically interacts with proliferating cell nuclear antigen in normal and translesion DNA synthesis". J. Biol. Chem. (United States) 277 (50): 48434–48440. doi:10.1074/jbc.M206889200. ISSN 0021-9258. PMID 12368291.
- ^ Shimazaki, Noriko; Yoshida Kenta, Kobayashi Toshiko, Toji Shingo, Tamai Katsuyuki, Koiwai Osamu (July 2002). "Over-expression of human DNA polymerase lambda in E. coli and characterization of the recombinant enzyme". Genes Cells (England) 7 (7): 639–651. doi:10.1046/j.1365-2443.2002.00547.x. ISSN 1356-9597. PMID 12081642.
- ^ Motegi, Akira; Liaw Hung-Jiun, Lee Kyoo-Young, Roest Henk P, Maas Alex, Wu Xiaoli, Moinova Helen, Markowitz Sanford D, Ding Hao, Hoeijmakers Jan H J, Myung Kyungjae (August 2008). "Polyubiquitination of proliferating cell nuclear antigen by HLTF and SHPRH prevents genomic instability from stalled replication forks". Proc. Natl. Acad. Sci. U.S.A. (United States) 105 (34): 12411–12416. doi:10.1073/pnas.0805685105. PMC 2518831. PMID 18719106.
- ^ Unk, Ildiko; Hajdú Ildikó, Fátyol Károly, Hurwitz Jerard, Yoon Jung-Hoon, Prakash Louise, Prakash Satya, Haracska Lajos (March 2008). "Human HLTF functions as a ubiquitin ligase for proliferating cell nuclear antigen polyubiquitination". Proc. Natl. Acad. Sci. U.S.A. (United States) 105 (10): 3768–3773. doi:10.1073/pnas.0800563105. PMC 2268824. PMID 18316726.
- ^ Brun, Jan; Chiu Roland, Lockhart Katherine, Xiao Wei, Wouters Bradly G, Gray Douglas A (2008). "hMMS2 serves a redundant role in human PCNA polyubiquitination". BMC Mol. Biol. (England) 9: 24. doi:10.1186/1471-2199-9-24. PMC 2263069. PMID 18284681.
- ^ Rual, Jean-François; Venkatesan Kavitha, Hao Tong, Hirozane-Kishikawa Tomoko, Dricot Amélie, Li Ning, Berriz Gabriel F, Gibbons Francis D, Dreze Matija, Ayivi-Guedehoussou Nono, Klitgord Niels, Simon Christophe, Boxem Mike, Milstein Stuart, Rosenberg Jennifer, Goldberg Debra S, Zhang Lan V, Wong Sharyl L, Franklin Giovanni, Li Siming, Albala Joanna S, Lim Janghoo, Fraughton Carlene, Llamosas Estelle, Cevik Sebiha, Bex Camille, Lamesch Philippe, Sikorski Robert S, Vandenhaute Jean, Zoghbi Huda Y, Smolyar Alex, Bosak Stephanie, Sequerra Reynaldo, Doucette-Stamm Lynn, Cusick Michael E, Hill David E, Roth Frederick P, Vidal Marc (October 2005). "Towards a proteome-scale map of the human protein-protein interaction network". Nature (England) 437 (7062): 1173–1178. doi:10.1038/nature04209. PMID 16189514.
- ^ Frouin, Isabelle; Maga Giovanni, Denegri Marco, Riva Federica, Savio Monica, Spadari Silvio, Prosperi Ennio, Scovassi A Ivana (October 2003). "Human proliferating cell nuclear antigen, poly(ADP-ribose) polymerase-1, and p21waf1/cip1. A dynamic exchange of partners". J. Biol. Chem. (United States) 278 (41): 39265–39268. doi:10.1074/jbc.C300098200. ISSN 0021-9258. PMID 12930846.
- ^ Gulbis, J M; Kelman Z, Hurwitz J, O'Donnell M, Kuriyan J (October 1996). "Structure of the C-terminal region of p21(WAF1/CIP1) complexed with human PCNA". Cell (UNITED STATES) 87 (2): 297–306. doi:10.1016/S0092-8674(00)81347-1. ISSN 0092-8674. PMID 8861913.
- ^ Touitou, R; Richardson J, Bose S, Nakanishi M, Rivett J, Allday M J (May. 2001). "A degradation signal located in the C-terminus of p21WAF1/CIP1 is a binding site for the C8 alpha-subunit of the 20S proteasome". EMBO J. (England) 20 (10): 2367–2375. doi:10.1093/emboj/20.10.2367. ISSN 0261-4189. PMC 125454. PMID 11350925.
- ^ Miyata T, Suzuki H, Oyama T, Mayanagi K, Ishino Y, Morikawa K (2005). "Open clamp structure in the clamp-loading complex visualized by electron microscopic image analysis". Proc. Natl. Acad. Sci. U.S.A. 102 (39): 13795–13800. doi:10.1073/pnas.0506447102. PMC 1236569. PMID 16169902.
Further reading[edit]
- Prosperi E (1998). "Multiple roles of the proliferating cell nuclear antigen: DNA replication, repair and cell cycle control". Progress in cell cycle research 3: 193–210. PMID 9552415.
- Miura M (1999). "Detection of chromatin-bound PCNA in mammalian cells and its use to study DNA excision repair". J. Radiat. Res. 40 (1): 1–12. doi:10.1269/jrr.40.1. PMID 10408173.
- Chen M, Pan ZQ, Hurwitz J (1992). "Sequence and expression in Escherichia coli of the 40-kDa subunit of activator 1 (replication factor C) of HeLa cells". Proc. Natl. Acad. Sci. U.S.A. 89 (7): 2516–2520. doi:10.1073/pnas.89.7.2516. PMC 48692. PMID 1313560.
- Kemeny MM, Alava G, Oliver JM (1993). "Improving responses in hepatomas with circadian-patterned hepatic artery infusions of recombinant interleukin-2". J. Immunother. 12 (4): 219–223. doi:10.1097/00002371-199211000-00001. PMID 1477073.
- Morris GF, Mathews MB (1990). "Analysis of the proliferating cell nuclear antigen promoter and its response to adenovirus early region 1". J. Biol. Chem. 265 (27): 16116–25. PMID 1975809.
- Webb G, Parsons P, Chenevix-Trench G (1991). "Localization of the gene for human proliferating nuclear antigen/cyclin by in situ hybridization". Hum. Genet. 86 (1): 84–6. PMID 1979311.
- Travali S, Ku DH, Rizzo MG et al. (1989). "Structure of the human gene for the proliferating cell nuclear antigen". J. Biol. Chem. 264 (13): 7466–72. PMID 2565339.
- Ku DH, Travali S, Calabretta B et al. (1989). "Human gene for proliferating cell nuclear antigen has pseudogenes and localizes to chromosome 20". Somat. Cell Mol. Genet. 15 (4): 297–307. doi:10.1007/BF01534969. PMID 2569765.
- Prelich G, Kostura M, Marshak DR et al. (1987). "The cell-cycle regulated proliferating cell nuclear antigen is required for SV40 DNA replication in vitro". Nature 326 (6112): 471–5. doi:10.1038/326471a0. PMID 2882422.
- Almendral JM, Huebsch D, Blundell PA et al. (1987). "Cloning and sequence of the human nuclear protein cyclin: homology with DNA-binding proteins". Proc. Natl. Acad. Sci. U.S.A. 84 (6): 1575–9. doi:10.1073/pnas.84.6.1575. PMC 304478. PMID 2882507.
- Chen IT, Smith ML, O'Connor PM, Fornace AJ (1995). "Direct interaction of Gadd45 with PCNA and evidence for competitive interaction of Gadd45 and p21Waf1/Cip1 with PCNA". Oncogene 11 (10): 1931–7. PMID 7478510.
- Li X, Li J, Harrington J et al. (1995). "Lagging strand DNA synthesis at the eukaryotic replication fork involves binding and stimulation of FEN-1 by proliferating cell nuclear antigen". J. Biol. Chem. 270 (38): 22109–12. doi:10.1074/jbc.270.38.22109. PMID 7673186.
- Fukuda K, Morioka H, Imajou S et al. (1995). "Structure-function relationship of the eukaryotic DNA replication factor, proliferating cell nuclear antigen". J. Biol. Chem. 270 (38): 22527–34. doi:10.1074/jbc.270.38.22527. PMID 7673244.
- Warbrick E, Lane DP, Glover DM, Cox LS (1995). "A small peptide inhibitor of DNA replication defines the site of interaction between the cyclin-dependent kinase inhibitor p21WAF1 and proliferating cell nuclear antigen". Curr. Biol. 5 (3): 275–282. doi:10.1016/S0960-9822(95)00058-3. PMID 7780738.
- Hall PA, Kearsey JM, Coates PJ et al. (1995). "Characterisation of the interaction between PCNA and Gadd45". Oncogene 10 (12): 2427–33. PMID 7784094.
- Kato S, Sekine S, Oh SW et al. (1995). "Construction of a human full-length cDNA bank". Gene 150 (2): 243–50. doi:10.1016/0378-1119(94)90433-2. PMID 7821789.
- Matsuoka S, Yamaguchi M, Matsukage A (1994). "D-type cyclin-binding regions of proliferating cell nuclear antigen". J. Biol. Chem. 269 (15): 11030–6. PMID 7908906.
- Szepesi A, Gelfand EW, Lucas JJ (1994). "Association of proliferating cell nuclear antigen with cyclin-dependent kinases and cyclins in normal and transformed human T lymphocytes". Blood 84 (10): 3413–21. PMID 7949095.
- Smith ML, Chen IT, Zhan Q et al. (1994). "Interaction of the p53-regulated protein Gadd45 with proliferating cell nuclear antigen". Science 266 (5189): 1376–80. doi:10.1126/science.7973727. PMID 7973727.
- Pan ZQ, Chen M, Hurwitz J (1993). "The subunits of activator 1 (replication factor C) carry out multiple functions essential for proliferating-cell nuclear antigen-dependent DNA synthesis". Proc. Natl. Acad. Sci. U.S.A. 90 (1): 6–10. doi:10.1073/pnas.90.1.6. PMC 45588. PMID 8093561.
PDB gallery
|
|
|
1u76: Crystal structure of hPCNA bound to residues 452-466 of the DNA polymerase-delta-p66 subunit
|
|
1u7b: Crystal structure of hPCNA bound to residues 331-350 of the flap endonuclease-1 (FEN1)
|
|
1ul1: Crystal structure of the human FEN1-PCNA complex
|
|
1vyj: STRUCTURAL AND BIOCHEMICAL STUDIES OF HUMAN PCNA COMPLEXES PROVIDE THE BASIS FOR ASSOCIATION WITH CDK/CYCLIN AND RATIONALE FOR INHIBITOR DESIGN
|
|
|
|
Tumor markers
|
|
Blood |
|
|
Endocrine |
Thyroid cancer
|
- Thyroglobulin
- Medullary thyroid cancer (Calcitonin
- Carcinoembryonic antigen)
|
|
Pheochromocytoma
|
- Normetanephrine
- Enolase 2
|
|
Neuroendocrine tumors
|
- Synaptophysin
- Chromogranin A
|
|
Neuroblastoma
|
|
|
|
Nervous system |
Brain tumor
|
|
|
Astrocytoma
|
- Glial fibrillary acidic protein
|
|
NC/Melanoma
|
- S-100 protein
- Melanoma inhibitory activity
|
|
|
Cardiovascular/
respiratory |
Lung cancer
|
- Carcinoembryonic antigen
- Enolase 2
- Autocrine motility factor
|
|
Hemangiosarcoma (endothelium)
|
|
|
|
Digestive |
Colorectal cancer
|
- CA19-9
- Carcinoembryonic antigen
|
|
Pancreatic cancer
|
- CA19-9
- Carcinoembryonic antigen
- CA 242
- Tumor-associated glycoprotein 72
|
|
Hepatocellular carcinoma
|
|
|
|
Reproductive/
urinary/
breast |
Ovarian tumor
|
- Surface epithelial-stromal tumor
- EC
- EST
- Choriocarcinoma
- Dysgerminoma
- Sertoli-Leydig cell tumour
- GCT
|
|
Testicular cancer
|
- βhCG
- Alpha-fetoprotein/AFP-L3
- CD30
|
|
Prostate cancer
|
- Prostate specific antigen
- Prostatic acid phosphatase
- Glutamate carboxypeptidase II
- erbB-3 receptor
- Early prostate cancer antigen-2
- SPINK1
- GOLPH2
- PCA3
- TMPRSS2
|
|
Germ cell tumor
|
|
|
Bladder cancer
|
|
|
Breast cancer
|
- CA 15-3
- erbB-2 receptor
- erbB-3 receptor
- Cathepsin D
|
|
|
General histology |
Sarcoma
|
|
|
Carcinoma (epithelium)
|
|
|
|
Musculoskeletal |
|
|
|
|
DNA replication (comparing Prokaryotic to Eukaryotic)
|
|
Initiation |
Prokaryotic
(initiation) |
|
|
Eukaryotic
(preparation in
G1 phase) |
- Origin recognition complex
- ORC1
- ORC2
- ORC3
- ORC4
- ORC5
- ORC6
- Minichromosome maintenance
- MCM2
- MCM3
- MCM4
- MCM5
- MCM6
- MCM7
- Autonomously replicating sequence
- Single-strand binding protein
|
|
Both |
- Origin of replication/Ori/Replicon
- Replication fork
- Lagging and leading strands
- Okazaki fragment
- Primer
|
|
|
Replication |
Prokaryotic
(elongation) |
- DNA polymerase III holoenzyme
- dnaC
- dnaE
- dnaH
- dnaN
- dnaQ
- dnaT
- dnaX
- holA
- holB
- holC
- holD
- holE
- Replisome
- DNA ligase
- DNA clamp
- Topoisomerase
- Prokaryotic DNA polymerase: DNA polymerase I
|
|
Eukaryotic
(synthesis in
S phase) |
- Replication factor C
- Flap endonuclease
- Topoisomerase
- Replication protein A
- Eukaryotic DNA polymerase: delta
|
|
Both |
- Movement: Processivity
- DNA ligase
|
|
|
Termination |
|
|
See also: DNA replication and repair-deficiency disorder B bsyn: dna (repl, cycl, reco, repr) · tscr (fact, tcrg, nucl, rnat, rept, ptts) · tltn (risu, pttl, nexn) · dnab, rnab/runp · stru (domn, 1°, 2°, 3°, 4°)
|
|