- 関
- foot-printing、footprinting
WordNet
- a way of doing something, especially a systematic way; implies an orderly logical arrangement (usually in steps)
PrepTutorEJDIC
- 〈C〉(特に秩序だった)(…の)『方法』,方式《+『of』+『名』(do『ing』)》 / 〈C〉〈U〉(思考行・行為・行動の)きちょうめんさ;秩序,筋道
UpToDate Contents
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English Journal
- Supercharging by m-NBA Improves ETD-Based Quantification of Hydroxyl Radical Protein Footprinting.
- Li X1, Li Z, Xie B, Sharp JS.
- Journal of the American Society for Mass Spectrometry.J Am Soc Mass Spectrom.2015 Apr 28. [Epub ahead of print]
- Hydroxyl radical protein footprinting (HRPF) is an MS-based technique for analyzing protein structure based on measuring the oxidation of amino acid side chains by hydroxyl radicals diffusing in solution. Spatial resolution of HRPF is limited by the smallest portion of the protein for which oxidatio
- PMID 25916598
- Fast photochemical oxidation of proteins coupled to multidimensional protein identification technology (MudPIT): expanding footprinting strategies to complex systems.
- Rinas A1, Jones LM.
- Journal of the American Society for Mass Spectrometry.J Am Soc Mass Spectrom.2015 Apr;26(4):540-6. doi: 10.1007/s13361-014-1017-6. Epub 2014 Nov 20.
- Peptides containing the oxidation products of hydroxyl radical-mediated protein footprinting experiments are typically much less abundant than their unoxidized counterparts. This is inherent to the design of the experiment as excessive oxidation may lead to undesired conformational changes or unfold
- PMID 25409907
- Human lymphoid translocation fragile zones are hypomethylated and have accessible chromatin.
- Lu Z1, Lieber MR2, Tsai AG1, Pardo CE3, Müschen M4, Kladde MP3, Hsieh CL2.
- Molecular and cellular biology.Mol Cell Biol.2015 Apr;35(7):1209-22. doi: 10.1128/MCB.01085-14. Epub 2015 Jan 26.
- Chromosomal translocations are a hallmark of hematopoietic malignancies. CG motifs within translocation fragile zones (typically 20 to 600 bp in size) are prone to chromosomal translocation in lymphomas. Here we demonstrate that the CG motifs in human translocation fragile zones are hypomethylated r
- PMID 25624348
Japanese Journal
- Molecular Cloning of Paired Related Homeobox 2 (Prx2) as a Novel Pituitary Transcription Factor
- Susa Takao,Ishikawa Akio,Kato Takako [他],NAKAYAMA Michie,KATO Yukio
- The Journal of reproduction and development 55(5), 502-511, 2009-10-01
- … DNase I footprinting revealed that broad regions of Fd2 were bound by Prx2 and that -596/-239 contained seven Prx2-binding sites. … The SELEX method using a random N15-mer oligonucleotide pool demonstrated that Prx2 monomer binds to a TAATT motif, which is present in Fd2 and -596/-239. …
- NAID 10025616312
- In Vivo and in Vitro Footprinting of Nucleosomes and Transcriptional Activators Using an Infrared-Fluorescence DNA Sequencer(Analytical Biochemistry)
- Morohashi Nobuyuki,Nakajima Kumiko,Kuwana Shunsuke [他],TACHIWANA Hiroaki,KURUMIZAKA Hitoshi,SHIMIZU Mitsuhiro
- Biological & pharmaceutical bulletin 31(2), 187-192, 2008-02-01
- … Here, we have developed a footprinting technique, using multi-cycle primer extension with an infrared-fluorescence DNA sequencer, to analyze chromatin structure in isolated yeast nuclei and transcriptional activator binding in living yeast cells. … We also applied this method to determine the position of the nucleosome in the 5S DNA fragment reconstituted in vitro. …
- NAID 110006570553
- Hydroxyl radical footprinting : a high-resolution method for mapping protein-DNA contacts
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