カタボライト・アクチベータ・プロテイン
WordNet
- any of a large group of nitrogenous organic compounds that are essential constituents of living cells; consist of polymers of amino acids; essential in the diet of animals for growth and for repair of tissues; can be obtained from meat and eggs and milk and legumes; "a diet high in protein"
- (biology) any agency bringing about activation; a molecule that increases the activity of an enzyme or a protein that increases the production of a gene product in DNA transcription
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Wikipedia preview
出典(authority):フリー百科事典『ウィキペディア(Wikipedia)』「2014/02/24 09:13:30」(JST)
[Wiki en表示]
Catabolite Activator Protein (CAP; also known as cAMP receptor protein, CRP) is a transcriptional activator that exists as a homodimer in solution, with each subunit comprising a ligand-binding domain at the N-terminus (CAPN, residues 1-138), which is also responsible for the dimerization of the protein, and a DNA-binding domain at the C-terminus (DBD, residues 139-209).[1][2] Two cAMP (cyclic AMP) molecules bind dimeric CAP with negative cooperativity and function as allosteric effectors by increasing the protein's affinity for DNA. Cytosolic cAMP levels rise when the amount of glucose transported into the cell is low.
CAP has a characteristic helix-turn-helix structure that allows it to bind to successive major grooves on DNA. The two helices are reinforcing each, causing a 43° turn in the structure, so overall causing a 94° degree turn in the DNA.[3]
This opens the DNA molecule up, allowing RNA polymerase to bind and transcribe the genes involved in lactose catabolism.[1][2] cAMP-CAP is required for transcription of the 'lac operon.
This requirement reflects the greater simplicity with which glucose may be metabolized in comparison to lactose. The cell "prefers" glucose, and, if it is available, the lac operon is not activated, even when lactose is present. This is an effective way of integrating the two different signals.
CAP is responsible for catabolite repression, a well-known example of a modulon.
References[edit]
- ^ a b Busby S., Ebright RH. (2001). "Transcription activation by catabolite activator protein (CAP)". J. Mol. Biol. 293: 199–213. doi:10.1006/jmbi.1999.3161. PMID 10550204.
- ^ a b Lawson C.L., Swigon D., Murakami K.S., Darst S.A., Berman H.M., Ebright RH. (2004). "Catabolite activator protein: DNA binding and transcription activation". Curr. Opin. Struct. Biol. 14: 10–20. doi:10.1016/j.sbi.2004.01.012. PMID 15102444.
- ^ Schultz, S. C.; Shields, G. C.; Steitz, T. A. (Aug 1991). "Crystal structure of a CAP-DNA complex: the DNA is bent by 90 degrees". Science 253 (5023): 1001–1007. Bibcode:1991Sci...253.1001S. doi:10.1126/science.1653449. ISSN 0036-8075. PMID 1653449. edit
External links[edit]
- Catabolite Activator Protein at the US National Library of Medicine Medical Subject Headings (MeSH)
Transcription factors and intracellular receptors
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(1) Basic domains
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(1.1) Basic leucine zipper (bZIP) |
- Activating transcription factor
- AP-1
- c-Fos
- FOSB
- FOSL1
- FOSL2
- JDP2
- c-Jun
- JUNB
- JunD
- BACH
- BATF
- BLZF1
- C/EBP
- CREB
- CREM
- DBP
- DDIT3
- GABPA
- HLF
- MAF
- NFE
- NFIL3
- NRL
- NRF
- XBP1
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(1.2) Basic helix-loop-helix (bHLH) |
- ATOH1
- AhR
- AHRR
- ARNT
- ASCL1
- BHLH
- ARNTL
- CLOCK
- EPAS1
- FIGLA
- HAND
- HES
- HEY
- HES1
- HIF
- ID
- LYL1
- MESP2
- MXD4
- MYCL1
- MYCN
- Myogenic regulatory factors
- Neurogenins
- NeuroD
- NPAS
- OLIG
- Pho4
- Scleraxis
- SIM
- TAL
- Twist
- USF1
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(1.3) bHLH-ZIP |
- AP-4
- MAX
- MITF
- MNT
- MLX
- MXI1
- Myc
- SREBP
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(1.4) NF-1 |
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(1.5) RF-X |
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(1.6) Basic helix-span-helix (bHSH) |
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(2) Zinc finger DNA-binding domains
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(2.1) Nuclear receptor (Cys4) |
subfamily 1 |
- Thyroid hormone
- CAR
- FXR
- LXR
- PPAR
- PXR
- RAR
- ROR
- Rev-ErbA
- VDR
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subfamily 2 |
- COUP-TF
- Ear-2
- HNF4
- PNR
- RXR
- Testicular receptor
- TLX
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subfamily 3 |
- Steroid hormone
- Androgen
- Estrogen
- Glucocorticoid
- Mineralocorticoid
- Progesterone
- Estrogen related
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subfamily 4 |
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subfamily 5 |
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subfamily 6 |
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subfamily 0 |
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(2.2) Other Cys4 |
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(2.3) Cys2His2 |
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(2.4) Cys6 |
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(2.5) Alternating composition |
- AIRE
- DIDO1
- GRLF1
- ING
- JARID
- JMJD1B
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(2.6) WRKY |
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(3) Helix-turn-helix domains
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(4) β-Scaffold factors with minor groove contacts
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(4.1) Rel homology region |
- NF-κB
- NFKB1
- NFKB2
- REL
- RELA
- RELB
- NFAT
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(4.2) STAT |
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(4.3) p53 |
- p53
- TBX
- 1
- 2
- 3
- 5
- 19
- 21
- 22
- TBR1
- TBR2
- TFT
- MYRF
- TP63
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(4.4) MADS box |
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(4.6) TATA-binding proteins |
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(4.7) High-mobility group |
- BBX
- HMGB
- HMGN
- HNF
- LEF1
- SOX
- 1
- 2
- 3
- 4
- 5
- 6
- 8
- 9
- 10
- 11
- 12
- 13
- 14
- 15
- 18
- 21
- SRY
- SSRP1
- TCF
- TOX
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(4.9) Grainyhead |
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(4.10) Cold-shock domain |
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(4.11) Runt |
- CBF
- CBFA2T2
- CBFA2T3
- RUNX1
- RUNX2
- RUNX3
- RUNX1T1
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(0) Other transcription factors
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(0.2) HMGI(Y) |
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(0.3) Pocket domain |
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(0.5) AP-2/EREBP-related factors |
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(0.6) Miscellaneous |
- ARID
- CAP
- IFI
- MLL
- MNDA
- NFY
- Rho/Sigma
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see also transcription factor/coregulator deficiencies
B bsyn: dna (repl, cycl, reco, repr) · tscr (fact, tcrg, nucl, rnat, rept, ptts) · tltn (risu, pttl, nexn) · dnab, rnab/runp · stru (domn, 1°, 2°, 3°, 4°)
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UpToDate Contents
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English Journal
- MC1R expression in HaCaT keratinocytes inhibits UVA-induced ROS production via NADPH oxidase- and cAMP-dependent mechanisms.
- Henri P, Beaumel S, Guezennec A, Poumès C, Stoebner PE, Stasia MJ, Guesnet J, Martinez J, Meunier L.SourceInstitute of Biomolecules Max Mousseron (IBMM), University Montpellier I and II, UMR CNRS 5247, Montpellier Cedex 5, France.
- Journal of cellular physiology.J Cell Physiol.2012 Jun;227(6):2578-85. doi: 10.1002/jcp.22996.
- Ultraviolet A (UVA) radiations are responsible for deleterious effects, mainly due to reactive oxygen species (ROS) production. Alpha-melanocyte stimulating hormone (α-MSH) binds to melanocortin-1 receptor (MC1R) in melanocytes to stimulate pigmentation and modulate cutaneous inflammatory responses
- PMID 21898403
- Electromagnetic fields (EMFs) and adenosine receptors modulate prostaglandin E(2) and cytokine release in human osteoarthritic synovial fibroblasts.
- Ongaro A, Varani K, Masieri FF, Pellati A, Massari L, Cadossi R, Vincenzi F, Borea PA, Fini M, Caruso A, De Mattei M.SourceDepartment of Morphology and Embryology, University of Ferrara, Ferrara, Italy. ngrlss@unife.it
- Journal of cellular physiology.J Cell Physiol.2012 Jun;227(6):2461-9. doi: 10.1002/jcp.22981.
- Synovial fibroblasts (SFs) contribute to the development of osteoarthritis (OA) by the secretion of a wide range of pro-inflammatory mediators, including cytokines and lipid mediators of inflammation. Previous studies suggest that electromagnetic fields (EMFs) may represent a potential therapeutic a
- PMID 21830213
Japanese Journal
- カタボライト活性化タンパク質と環状AMP複合体の構造解析
- 薄木 亮,仙石 康雄,松岡 誠,田中 成典,栗田 典之
- Journal of Computer Aided Chemistry 5, 19-25, 2004
- … カタボライト活性化タンパク質 (Catabolite Activator Protein:CAP)は、環状AMP(cAMP)と結合しCAP-cAMP複合体となりDNAの特定部位に結合し、RNAポリメラーゼのDNAへの結合を促進する。 …
- NAID 130004428054
- Multiple control of flagellum biosynthesis in Escherichia coli : role of H-NS protein and the cyclic AMP-catabolite activator protein complex in transcription of the flhDC master operon
- Decrease in Expression of the Master Operon of Flagellin Synthesis in a dnaA46 Mutant of Escherichia coli
- Mizushima Tohru,Koyanagi Rimiko,Katayama Tsutomu [他],MIKI Takeyoshi,SEKIMIZU Kazuhisa
- Biological & pharmaceutical bulletin 20(4), 327-331, 1997-04-15
- … The decrease in expression of the flhD gene was not related to the cAMP-catabolite activator protein (CAP) pathway. … We tentatively conclude that DnaA protein is involved in the expression of the flhD gene by a mechanism independent of the cAMP-CAP pathway. …
- NAID 110003639050
Related Links
- VI. References Gunasekera, Angelo, Yon W. Ebright, and Richard H. Ebright. 1992. DNA Sequence Determinants for Binding of the Escherichia coli Catabolite Gene Activator Protein. The Journal of ...
- Recent structures of Escherichia coli catabolite activator protein (CAP) in complex with DNA, and in complex with RNA polymerase α subunit C-terminal domain (αCTD) and DNA, have yielded insights into how CAP binds DNA and ...
Related Pictures
★リンクテーブル★
[★]
- 英
- cyclic AMP receptor protein CRP
- 同
- カタボライトアクチベーター蛋白質 catabolite activator protein CAP、カタボライト遺伝子アクチベーター蛋白質 catabolite gene activator protein
[★]
[★]
- 英
- catabolite activator protein CAP
- 同
- カタボライト活性化タンパク catabolite activator protein, カタボライト遺伝子活性化タンパク catabolite gene activator protein
[★]
[★]
- 関
- decomposition product、degradation product
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