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- euchromatin
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出典(authority):フリー百科事典『ウィキペディア(Wikipedia)』「2013/02/01 14:12:40」(JST)
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Euchromatin is a lightly packed form of chromatin (DNA, RNA and protein) that is rich in gene concentration, and is often (but not always) under active transcription. Euchromatin comprises the most active portion of the genome within the cell nucleus. 92% of the human genome is euchromatic.[1]
Contents
- 1 Structure
- 2 Appearance
- 3 Function
- 4 References
- 5 External links
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Structure
The structure of euchromatin is reminiscent of an unfolded set of beads along a string, wherein those beads represent nucleosomes. Nucleosomes consist of eight proteins known as histones, with approximately 147 base pairs of DNA wound around them; in euchromatin, this wrapping is loose so that the raw DNA may be accessed. Each core histone possesses a `tail' structure, which can vary in several ways; it is thought that these variations act as "master control switches," which determine the overall arrangement of the chromatin. In particular, it is believed that the presence of methylated lysine 4 on the histone tails acts as a general marker for euchromatin.
Appearance
In general, euchromatin appears as light-colored bands when stained in G banding and observed under an optical microscope, in contrast to heterochromatin, which stains darkly. This lighter staining is due to the less compact structure of euchromatin. The basic structure of euchromatin is an elongated, open, 10 nm microfibril, as noted by electron microscopy. In prokaryotes, euchromatin is the only form of chromatin present; this indicates that the heterochromatin structure evolved later along with the nucleus, possibly as a mechanism to handle increasing genome size.
Function
Euchromatin participates in the active transcription of DNA to mRNA products. The unfolded structure allows gene regulatory proteins and RNA polymerase complexes to bind to the DNA sequence, which can then initiate the transcription process. Not all euchromatin is necessarily transcribed, but in general that which is not is transformed into heterochromatin to protect the genes while they are not in use. There is therefore a direct link to how actively productive a cell is and the amount of euchromatin that can be found in its nucleus. It is thought that the cell uses transformation from euchromatin into heterochromatin as a method of controlling gene expression and replication, since such processes behave differently on densely compacted chromatin, known as the `accessibility hypothesis'. One example of constitutive euchromatin that is 'always turned on' is housekeeping genes, which code for the proteins needed for basic functions of cell survival.
References
- ^ http://www.nature.com/nature/journal/v431/n7011/full/nature03001.html
External links
- http://www.euchromatin.net/
- Research news in Euchromatin
- Zheng C, Hayes J (2003). "Structures and interactions of the core histone tail domains.". Biopolymers 68 (4): 539–46. doi:10.1002/bip.10303. PMID 12666178.
- Muegge K (2003). "Modifications of histone cores and tails in V(D)J recombination". Genome Biol 4 (4): 211. doi:10.1186/gb-2003-4-4-211. PMC 154571. PMID 12702201. //www.ncbi.nlm.nih.gov/pmc/articles/PMC154571/. Article
- BU Histology Learning System: 20102loa
Genetics: chromosomes
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General |
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Classification |
- Autosome
- Sex chromosome
- Microchromosome
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Evolution |
- Chromosomal inversion
- Chromosomal translocation
- Polyploidy
- Paleopolyploidy
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Structure |
- Nucleosome
- Telomere: Telomere-binding protein (TINF2)
- Chromatid
- Circular chromosome
- Linear chromosome
- Polytene chromosome
Chromatin
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- Euchromatin
- Heterochromatin
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Histone
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Centromere
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- A
- B
- C1
- C2
- E
- F
- H
- I
- J
- K
- M
- N
- O
- P
- Q
- T
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B strc: edmb (perx), skel (ctrs), epit, cili, mito, nucl (chro)
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English Journal
- Fundamental differences in endoreplication in mammals and Drosophila revealed by analysis of endocycling and endomitotic cells.
- Sher N, Von Stetina JR, Bell GW, Matsuura S, Ravid K, Orr-Weaver TL.SourceWhitehead Institute and Department of Biology, Massachusetts Institute of Technology, Cambridge, MA 02142.
- Proceedings of the National Academy of Sciences of the United States of America.Proc Natl Acad Sci U S A.2013 Jun 4;110(23):9368-73. doi: 10.1073/pnas.1304889110. Epub 2013 Apr 23.
- Throughout the plant and animal kingdoms specific cell types become polyploid, increasing their DNA content to attain a large cell size. In mammals, megakaryocytes (MKs) become polyploid before fragmenting into platelets. The mammalian trophoblast giant cells (TGCs) exploit their size to form a barr
- PMID 23613587
- Microanatomical study of testis in juvenile ostrich (Struthio camelus).
- Hassanzadeh B, Nabipour A, Rassouli MB, Dehghani H.SourceDepartment of Basic Science, Faculty of Veterinary Medicine, Ferdowsi University of Mashhad, Mashhad, Iran, belaldvm@hotmail.com.
- Anatomical science international.Anat Sci Int.2013 Jun;88(3):134-40. doi: 10.1007/s12565-013-0175-0. Epub 2013 Apr 5.
- The majority of investigations on the testis, as the main organ of male reproductive system, have been performed in mammalian species, with few studies on bird species. Thus, the structure of the ostrich testis remains largely unknown. The aim of this study was to investigate the microanatomical cha
- PMID 23558799
- Histone-lysine methyltransferase EHMT2 is involved in proliferation, apoptosis, cell invasion, and DNA methylation of human neuroblastoma cells.
- Lu Z, Tian Y, Salwen HR, Chlenski A, Godley LA, Raj JU, Yang Q.SourceDepartment of Pediatrics, College of Medicine, University of Illinois at Chicago, Chicago, Illinois 60612, USA.
- Anti-cancer drugs.Anticancer Drugs.2013 Jun;24(5):484-93. doi: 10.1097/CAD.0b013e32835ffdbb.
- Neuroblastoma (NB), a childhood neoplasm arising from neural crest cells, is characterized by a diversity of clinical behaviors ranging from spontaneous remission to rapid tumor progression and death. In addition to genetic abnormalities, recent studies have indicated that epigenetic aberrations als
- PMID 23466651
Japanese Journal
- Expression of the rice microRNA miR820 is associated with epigenetic modifications at its own locus
- Nosaka Misuzu,Ono Akemi,Ishiwata Aiko [他],SHIMIZU SATO Sae,ISHIMOTO Kiyoe,NODA Yusaku,SATO Yutaka
- Genes & genetic systems 88(2), 105-112, 2013-04-25
- … MIRNA genes are usually located in transcriptionally active euchromatic regions. …
- NAID 10031183176
- Metaphase karyotypes of four species of Calliphoridae (Diptera)
- Agrawal Uma Rani,Bajpai Neelam,Kurahashi Hiromu [他],TEWARI Raghav Ram
- Chromosome science 13(3), 49-52, 2011-08-01
- … The chromosome complement of all the species comprises 2n=12, with five pairs of large euchromatic autosomes and a pair of heteromorphic sex chromosomes-XX in females and XY in males. …
- NAID 10029463078
- Boundaries of transcriptionally silent chromatin in Saccharomyces cerevisiae
- Sun Jing-Qian,Hatanaka Akira,Oki Masaya
- Genes & genetic systems 86(2), 73-81, 2011-04-25
- … Many assays show that specific DNA regulatory elements separate a euchromatic locus from a neighboring heterochromatic domain and thereby function as a boundary. …
- NAID 10029516319
Related Links
- Euchromatin is a lightly packed form of chromatin (DNA, RNA and protein) that is rich in gene concentration, and is often (but not always) under active transcription . Unlike heterochromatin, it is found in both cells with nuclei (eukaryotes) and ...
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- euchromatin、euchromatic
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