- 関
- lettuce infectious yellows virus
Wikipedia preview
出典(authority):フリー百科事典『ウィキペディア(Wikipedia)』「2014/03/14 17:28:25」(JST)
[Wiki en表示]
Crinivirus |
Virus classification |
Group: |
Group IV ((+)ssRNA) |
Family: |
Closteroviridae |
Genus: |
Crinivirus |
Species |
Abutilon yellows virus
Beet pseudoyellows virus
Cucumber yellows virus
Cucurbit yellow stunting disorder virus
Diodia vein chlorosis virus
Lettuce chlorosis virus
Lettuce infectious yellows virus
Potato yellow vein virus
Sweet potato chlorotic stunt virus
Tomato chlorosis virus
Tomato infectious chlorosis virus
|
3'-terminal pseudoknot in SPCSV |
|
Predicted secondary structure of the 3'-terminal pseudoknot in SPCSV |
Identifiers |
Symbol |
? |
Rfam |
RF01091 |
Other data |
RNA type |
Cis-reg |
Domain(s) |
Crinivirus |
Crinivirus is a genus of plant viruses that belong to the family Closteroviridae. They are also known as the lettuce infectious yellows virus group. They are linear, single-stranded positive sense RNA viruses (and are therefore group IV).[1]
Examples of species whose entire genomes have been sequenced that are currently classified into the genus include the Sweet potato chlorotic stunt virus (SPCSV) and the Lettuce infectious yellows virus (LIYV).[2][3]
Contents
- 1 Virus particle structure
- 2 Genetics
- 3 References
- 4 External links
Virus particle structure[edit]
The Universal Virus Database describes that the virions of the genus each consists of a non-enveloped, filamentous capsid "with a length of 1200–2000 nm and a width of 10-13 nm".[3] The capsid is also described to have "helical symmetry".
Genetics[edit]
The viruses of this genus have segmented, bipartite genomes that add up to 7,500–19,500 nucleotides in length. Their genomes also code for proteins that do not form part of the virion particles as well as structural proteins. The Universal Virus Database describes that their genome sequences near their 3'-ends are capable of hairpin-loop formation and also believe that their 5'-ends may have methylated caps.[3] Each of the viral RNA molecules contains four hair-pin structures and a pseudoknot in the 3'UTR. The pseudoknot is unusual in that it contains a small stem-loop structure inside loop L1.[4] In the related genus Closterovirus, these secondary structures have been found to be important in viral RNA replication.[5]
References[edit]
- ^ ICTVdB Management (2006). 00.017.0.02. Crinivirus. In: ICTVdB—The Universal Virus Database, version 4. Büchen-Osmond, C. (Ed), Columbia University, New York, USA
- ^ Journal of Virology. 2002 September; 76(18): 9260–9270
- ^ a b c ICTVdB Management (2006)
- ^ Livieratos IC, Eliasco E, Müller G, et al. (July 2004). "Analysis of the RNA of Potato yellow vein virus: evidence for a tripartite genome and conserved 3'-terminal structures among members of the genus Crinivirus". J. Gen. Virol. 85 (Pt 7): 2065–75. doi:10.1099/vir.0.79910-0. PMID 15218192.
- ^ Satyanarayana T, Gowda S, Ayllón MA, Albiach-Martí MR, Dawson WO (August 2002). "Mutational analysis of the replication signals in the 3'-nontranslated region of citrus tristeza virus". Virology 300 (1): 140–52. doi:10.1006/viro.2002.1550. PMID 12202214.
External links[edit]
- Viralzone: Crinivirus
- Rfam entry for 3'-terminal pseudoknot in SPCSV
- Rfam entry for 3'-terminal pseudoknot of CuYV/BPYV
- Rfam entry for 3'-terminal pseudoknot in PYVV
Gallery of secondary structure images
|
|
|
3'-terminal pseudoknot in SPCSV: Predicted secondary structure taken from the Rfam database. Family RF01091.
|
|
3'-terminal pseudoknot in PYVV: Predicted secondary structure taken from the Rfam database. Family RF01078.
|
|
3'-terminal pseudoknot of CuYV/BPYV: Predicted secondary structure taken from the Rfam database. Family RF01095.
|
|
|
|
English Journal
- Transmission specificities of plant viruses with the newly identified species of the Bemisia tabaci species complex.
- Polston JE1, De Barro P, Boykin LM.
- Pest management science.Pest Manag Sci.2014 Oct;70(10):1547-52. doi: 10.1002/ps.3738. Epub 2014 Mar 3.
- Bemisia tabaci has had a colorful nomenclatural past and is now recognized as a species complex. This new species framework has added many new areas of research including adding new insight into the virus transmission specificity of the species in the B. tabaci species complex. There is a wide dispa
- PMID 24464790
- Synergistic interactions of begomoviruses with Sweet potato chlorotic stunt virus (genus Crinivirus) in sweet potato (Ipomoea batatas L.).
- Cuellar WJ1, Galvez M, Fuentes S, Tugume J, Kreuze J.
- Molecular plant pathology.Mol Plant Pathol.2014 Sep 4. doi: 10.1111/mpp.12200. [Epub ahead of print]
- Three hundred and ninety-four sweet potato accessions from Latin America and East Africa were screened by polymerase chain reaction (PCR) for the presence of begomoviruses, and 46 were found to be positive. All were symptomless in sweet potato and generated leaf curling and/or chlorosis in Ipomoea s
- PMID 25187172
- Infectious cDNA clones of the crinivirus Tomato chlorosis virus are competent for systemic plant infection and whitefly-transmission.
- Orílio AF1, Fortes IM1, Navas-Castillo J2.
- Virology.Virology.2014 Sep;464-465:365-74. doi: 10.1016/j.virol.2014.07.032. Epub 2014 Aug 9.
- Tomato chlorosis virus (ToCV) (genus Crinivirus, family Closteroviridae) causes important emergent diseases in tomato and other solanaceous crops. ToCV is not transmitted mechanically and is naturally transmitted by whiteflies. The ToCV genome consists of two molecules of linear, positive-sense RNA
- PMID 25113907
Japanese Journal
- Production of antiserum and immunodetection of Cucurbit chlorotic yellows virus, a novel whitefly-transmitted crinivirus
- KUBOTA Kenji,USUGI Tomio,TSUDA Shinya
- Journal of general plant pathology : JGPP 77(2), 116-120, 2011-03-01
- NAID 10029720879
- Yellowing disease of tomato caused by Tomato chlorosis virus newly recognized in Japan
- HIROTA Tomoki,NATSUAKI Tomohide,MURAI Tamotsu,NISHIGAWA Hisashi,NIIBORI Kenji,GOTO Kakushi,HARTONO Sedyo,SUASTIKA Gede,OKUDA Seiichi
- Journal of general plant pathology : JGPP 76(2), 168-171, 2010-04-01
- NAID 10029719514
- 新規クリニウイルスによるメロン退緑黄化病(新称)の発生
- 行徳 裕,岡崎 真一郎,古田 明子 [他]
- 日本植物病理学会報 75(2), 109-111, 2009-05
- 2004年、熊本県北部のメロン栽培地帯において葉が黄化する障害が発生し、2004年から2006年に佐賀、宮崎、大分および長崎県でも同様の症状が確認された。本症状は、8〜10月に定植されるアールス系メロンを中心に発生している。九州地域の発生面積は、約200haと推定される。熊本県では、2004年にタバココナジラミバイオタイプQ(以下バイオタイプQ)の発生が初めて確認された。本バイオタイプは、既発生の …
- NAID 40016708738
Related Links
- Research Topics, Publications, Genomes and Genes, Scientific Experts, Species about crinivirus ... The sequence of Lettuce chlorosis virus (LCV) (genus Crinivirus) was determined and found to contain unique open reading frames ...
- Description of a severe synergistic disease caused by the crinivirus SPCSV Karyeija RF et al (2000) Virology 269:26–36 2002 Second Crinivirus, SPCSV, sequenced, revealing several new features Kreuze JF et al (2002) J Virol 76 ...
★リンクテーブル★
[★]
- 英
- crinivirus
- 関
- レタス伝染性黄斑ウイルス
[★]
- 関
- crinivirus