コリプレッサー
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出典(authority):フリー百科事典『ウィキペディア(Wikipedia)』「2015/05/25 13:51:40」(JST)
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In the field of molecular biology, a corepressor is a substance that inhibits the expression of genes. In prokaryotes, corepressors are small molecules whereas in eukaryotes, corepressors are proteins. A corepressor does not directly bind to DNA, but instead indirectly regulates gene expression by binding to repressors.
A corepressor downregulates (or represses) the expression of genes by binding to and activating a repressor transcription factor. The repressor in turn binds to a gene promoter (a sequence of DNA adjacent to the regulated gene), thereby blocking transcription of that gene.
Contents
- 1 Function
- 1.1 Prokaryotes
- 1.2 Eukaryotes
- 2 See also
- 3 References
- 4 External links
Function
Prokaryotes
In prokaryotes, the term corepressor is used to denote the activating ligand of a repressor protein. For example, the E. coli tryptophan repressor (TrpR) is only able to bind to DNA and repress transcription of the trp operon when its corepressor tryptophan is bound to it. TrpR in the absence of tryptophan is known as an aporepressor and is inactive in repressing gene transcription.[1] Trp operon encodes enzymes responsible for the synthesis of tryptophan. Hence TrpR provides a negative feedback mechanism that regulates the biosynthesis of tryptophan.
In short tryptophan acts as a corepressor for its own biosynthesis.[2]
Eukaryotes
In eukaryotes, a corepressor is a protein that binds to transcription factors.[3] In the absence of corepressors and in the presence of coactivators, transcription factors upregulate gene expression. Coactivators and corepressors compete for the same binding sites on transcription factors. A second mechanism by which corepressors may repress transcriptional initiation when bound to transcription factor/DNA complexes is by recruiting histone deacetylases which catalyze the removal of acetyl groups from lysine residues. This increases the positive charge on histones which strengthens the electrostatic attraction between the positively charged histones and negatively charged DNA, making the DNA less accessible for transcription.[4][5]
In humans several dozen to several hundred corepressors are known, depending on the level of confidence with which the characterisation of a protein as a corepressors can be made.[6]
See also
- Transcription coregulator
- TcoF-DB
References
- ^ Evans PD, Jaseja M, Jeeves M, Hyde EI (December 1996). "NMR studies of the Escherichia coli Trp repressor.trpRs operator complex". Eur. J. Biochem. 242 (3): 567–75. doi:10.1111/j.1432-1033.1996.0567r.x. PMID 9022683.
- ^ Foster JB, Slonczewski J (2010). Microbiology: An Evolving Science (Second ed.). New York: W. W. Norton & Company. ISBN 0-393-93447-0.
- ^ Jenster G (August 1998). "Coactivators and corepressors as mediators of nuclear receptor function: an update". Mol. Cell. Endocrinol. 143 (1-2): 1–7. doi:10.1016/S0303-7207(98)00145-2. PMID 9806345.
- ^ Lazar MA (2003). "Nuclear receptor corepressors". Nucl Recept Signal 1: e001. doi:10.1621/nrs.01001. PMC 1402229. PMID 16604174.
- ^ Goodson M, Jonas BA, Privalsky MA (2005). "Corepressors: custom tailoring and alterations while you wait". Nucl Recept Signal 3 (Oct 21): e003. doi:10.1621/nrs.03003. PMC 1402215. PMID 16604171.
- ^ Schaefer U, Schmeier S, Bajic VB (January 2011). "TcoF-DB: dragon database for human transcription co-factors and transcription factor interacting proteins". Nucleic Acids Res. 39 (Database issue): D106–10. doi:10.1093/nar/gkq945. PMC 3013796. PMID 20965969.
External links
- Co-Repressor Proteins at the US National Library of Medicine Medical Subject Headings (MeSH)
Transcription (Bacterial, Eukaryotic)
|
|
Transcriptional regulation |
prokaryotic |
- Operon
- lac operon
- trp operon
- gab operon
- ara operon
- gal operon
- Repressor
- lac repressor
- trp repressor
|
|
eukaryotic |
Histone-modifying enzymes
(histone/nucleosome): |
- Histone methylation/Histone methyltransferase
- Histone demethylase
- Histone acetylation and deacetylation
- Histone deacetylase HDAC1
- Histone acetyltransferase
|
|
DNA methylation: |
|
|
Chromatin remodeling: |
|
|
|
both |
- Transcription coregulator
- Inducer
|
|
|
Promotion |
- Promoter
- Pribnow box
- TATA box
- BRE
- CAAT box
- Response element
- Enhancer
- Insulator
- Silencer
- Internal control region
|
|
Initiation (bacterial,
eukaryotic |
|
|
Elongation |
- bacterial RNA polymerase: rpoB
- eukaryotic RNA polymerase: RNA polymerase II
|
|
Termination
(bacterial,
eukaryotic) |
- Terminator
- Intrinsic termination
- Rho factor
|
|
Index of genetics
|
|
Description |
- Gene expression
- DNA
- replication
- cycle
- recombination
- repair
- binding proteins
- Transcription
- factors
- regulators
- nucleic acids
- RNA
- RNA binding proteins
- ribonucleoproteins
- repeated sequence
- modification
- Translation
- ribosome
- modification
- nexins
- Proteins
- domains
- Structure
- primary
- secondary
- tertiary
- quaternary
|
|
Disease |
- Replication and repair
- Transcription factor
- Transcription
- Translation
|
|
|
Transcription coregulators
|
|
Coactivators |
- ARA (54, 55, 70)
- BCAS3
- CARM1
- p300-CBP (EP300, CREBBP)
- CRTC (1, 2, 3)
- DRIP/TRAP (MED1 Drip205/Trap220)
- MN1
- PCAF
- PNRC (1, 2)
- PPARGC (1A, 1B)
- TGFB1I1
NCOA1 (SRC-1)
- NCOA2 (GRIP1/SRC-2/TIF2)
- NCOA3 (AIB/SRC-3/TRAM-1)
- NCOA4 (ARA70)
- NCOA5 (CIA)
- NCOA6 (RAP250)
- NCOA7 (ERAP140)
|
|
Corepressors |
- CTBP (1, 2)
- Hairless homolog
- LCOR
- NRIP1 (RIP140)
- PELP-1
- RCOR1
- Rb
- SIN3A
- SIN3B
- Tripartite motif family TRIM (24, 28, 33)
NCOR1
- NCOR2 (SMRT)
|
|
ATP-dependent remodeling factors |
- Chromatin Structure Remodeling (RSC) Complex
- SWI/SNF
|
|
Index of genetics
|
|
Description |
- Gene expression
- DNA
- replication
- cycle
- recombination
- repair
- binding proteins
- Transcription
- factors
- regulators
- nucleic acids
- RNA
- RNA binding proteins
- ribonucleoproteins
- repeated sequence
- modification
- Translation
- ribosome
- modification
- nexins
- Proteins
- domains
- Structure
- primary
- secondary
- tertiary
- quaternary
|
|
Disease |
- Replication and repair
- Transcription factor
- Transcription
- Translation
|
|
|
UpToDate Contents
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English Journal
- RECEPTOR TYROSYNE KINASE EPHA2 IS A DIRECT TARGET-GENE OF HIC1 (HYPERMETHYLATED IN CANCER 1).
- Foveau B, Boulay G, Pinte S, Van Rechem C, Rood BR, Leprince D.SourceIBL CNRS UMR8161, France;
- The Journal of biological chemistry.J Biol Chem.2012 Jan 3. [Epub ahead of print]
- The tumor suppressor gene Hypermethylated in Cancer 1 (HIC1), which encodes a transcriptional repressor, is epigenetically silenced in many human tumors. Here, we show that ectopic expression of HIC1 in the highly malignant MDA-MB-231 breast cancer cell line severely impairs cell proliferation, migr
- PMID 22184117
- Structural basis of coactivation of liver receptor homolog-1 by β-catenin.
- Yumoto F, Nguyen P, Sablin EP, Baxter JD, Webb P, Fletterick RJ.SourceDepartment of Biochemistry and Biophysics, University of California San Francisco, 600 16th Street, San Francisco, CA 94158.
- Proceedings of the National Academy of Sciences of the United States of America.Proc Natl Acad Sci U S A.2012 Jan 3;109(1):143-8. Epub 2011 Dec 20.
- We report the three-dimensional structure of a β-catenin armadillo repeat in complex with the liver receptor homolog-1 (LRH-1) ligand binding domain at 2.8 Å resolution as the first structure of β-catenin in complex with any nuclear receptor. The surface of β-catenin that binds LRH-1 partly ov
- PMID 22187462
Japanese Journal
- Acquisition of the Ability To Assimilate Mannitol by Saccharomyces cerevisiae through Dysfunction of the General Corepressor Tup1-Cyc8.
- Production of pyruvate from mannitol by mannitol-assimilating pyruvate decarboxylase-negative Saccharomyces cerevisiae.
- Molecular Mechanisms of the Antileukemia Activities of Retinoid and Arsenic
Related Links
- corepressor 【名】《遺伝》コリプレッサー、抑制補体 - アルクがお届けする進化するオンライン英和・和英辞書データベース。一般的な単語や連語から、イディオム、専門用語、スラングまで幅広く収録。
- corepressor co·re·pres·sor (kō'rĭ-prěs'ər) n. A substance that combines with and activates a genetic repressor, thus preventing gene transcription and inhibiting protein synthesis.
Related Pictures
★リンクテーブル★
[★]
- 英
- corepressor、co-repressor
- 関
- コリプレッサー、転写共役制御因子
[★]
- 英
- corepressor、co-repressor
- 関
- コリプレッサー、補助抑制因子