Gad-1 and Gad-2 are antimicrobial peptide (AMP) sequences encoded by paralogous genes. They are rich in histidine, which suggests that their activity might be pH-dependent. We examined their structure-function relationships with a view to learning how to improve AMP therapeutic ratios. Activity assa
Supramolecular amphipathicity for probing antimicrobial propensity of host defence peptides.
Ravi J1, Bella A, Correia AJ, Lamarre B, Ryadnov MG.
Physical chemistry chemical physics : PCCP.Phys Chem Chem Phys.2015 Jun 28;17(24):15608-14. doi: 10.1039/c5cp01185j. Epub 2015 May 12.
Host defence peptides (HDPs) are effector components of innate immunity that provide defence against pathogens. These are small-to-medium sized proteins which fold into amphipathic conformations toxic to microbial membranes. Here we explore the concept of supramolecular amphipathicity for probing an
Revisiting the membrane interaction mechanism of a membrane-damaging β-barrel pore-forming toxin Vibrio cholerae cytolysin.
Rai AK1, Chattopadhyay K1.
Molecular microbiology.Mol Microbiol.2015 Jun 8. doi: 10.1111/mmi.13084. [Epub ahead of print]
Vibrio cholerae cytolysin (VCC) permeabilises target cell membranes by forming transmembrane oligomeric β-barrel pores. VCC has been shown to associate with the target membranes via amphipathicity-driven spontaneous partitioning into the membrane environment. More specific interaction(s) of VCC wit
Amphipathic alpha-helix mediates the heterodimerization of soluble guanylyl cyclase.
Shiga Takumi,Suzuki Norio
Zoological science 22(7), 735-742, 2005-07-25
… Experiments with site-directed α1 subunit mutant proteins demonstrated that the amphipathicity of the α-helix is important for the formation of the heterodimer, and Leu463 in the α-helix region plays a critical role in the formation of a properly arranged active center in the dimer. …
1. J Mol Microbiol Biotechnol. 2001 Oct;3(4):501-2. A web-based program (WHAT) for the simultaneous prediction of hydropathy, amphipathicity, secondary structure and transmembrane topology for a single protein sequence. Zhai Y ...
Hi Everyone,I'm new to this forum and I've come to get help with determining amphipathicity of small molecules. What parameters are used to define amphipathic ... ... Return to forum!show!: 69 | Reply: 0 amphipathicity [Copy URL]