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Benchmarking quantitative label-free LC-MS data processing workflows using a complex spiked proteomic standard dataset.

Ramus C1, Hovasse A2, Marcellin M3, Hesse AM4, Mouton-Barbosa E5, Bouyssié D6, Vaca S7, Carapito C8, Chaoui K9, Bruley C10, Garin J11, Cianférani S12, Ferro M13, Van Dorssaeler A14, Burlet-Schiltz O15, Schaeffer C16, Couté Y17, Gonzalez de Peredo A18.
Journal of proteomics.J Proteomics.2016 Jan 30;132:51-62. doi: 10.1016/j.jprot.2015.11.011. Epub 2015 Nov 14.
Proteomic workflows based on nanoLC-MS/MS data-dependent-acquisition analysis have progressed tremendously in recent years. High-resolution and fast sequencing instruments have enabled the use of label-free quantitative methods, based either on spectral counting or on MS signal analysis, which appea
PMID 26585461

Vaca M1, Cobeta I2, Mora E3, Reyes P3.
Journal of voice : official journal of the Voice Foundation.J Voice.2016 Jan 21. pii: S0892-1997(15)00294-5. doi: 10.1016/j.jvoice.2015.12.010. [Epub ahead of print]
OBJECTIVES: Incomplete glottal closure is one of the key clinical aspects of presbylarynx. The objective of the present study is to determine the diagnostic yield of several tests for the assessment of glottal competence in age-related dysphonia.STUDY DESIGN: Cross-sectional prospective.METHODS: One
PMID 26804785

VacA, cagA, iceA and oipA genotypes status and antimicrobial resistance properties of Helicobacter pylori isolated from various types of ready to eat foods.

Hemmatinezhad B1, Momtaz H2, Rahimi E3.
Annals of clinical microbiology and antimicrobials.Ann Clin Microbiol Antimicrob.2016 Jan 20;15(1):2. doi: 10.1186/s12941-015-0115-z.
BACKGROUND: Despite the high clinical standing of Helicobacter pylori, its exact routes of transmission and origin have not been determined. Based on the contentious hypothesis, foods play an important roles in the transmission of H. pylori to humans. The present study was carried out to investigate
PMID 26792758

The Genetic Diversity of Helicobacter pylori Virulence Genes Is Not Associated with Gastric Atrophy Progression

Kita Masahide,Yokota Kenji,Okada Hiroyuki,Take Susumu,Takenaka Ryuta,Kawahara Yoshiro,Oguma Keiji,Matsushita Osamu,Yamamoto Kazuhide
Acta Medica Okayama 67(2), 93-98, 2013-04-00
… We analyzed iceA, babA, vacA, cagA, and cagE genes by PCR. … The major phenotype of the vacA gene was s1c/m1 (93ｵ). …
NAID 120005232499

Low-density Lipoprotein Receptor-related Protein-1 (LRP1) Mediates Autophagy and Apoptosis Caused by Helicobacter pylori VacA

Yahiro Kinnosuke,Satoh Mamoru,Nakano Masayuki,Hisatsune Junzo,Isomoto Hajime,Sap Jan,Suzuki Hidekazu,Nomura Fumio,Noda Masatoshi,Moss Joel,Hirayama Toshiya
Journal of Biological Chemistry 287(37), 31104-31115, 2012-09-07
… In Helicobacter pylori infection, vacuolating cytotoxin (VacA)-induced mitochondrial damage leading to apoptosis is believed to be a major cause of cell death. … It has also been proposed that VacA-induced autophagy serves as a host mechanism to limit toxin-induced cellular damage. …
NAID 120005230520

Glucose-induced production of a Penicillium purpurogenum xylanase by Aspergillus nidulans

Ravanal Maria-Cristina,Espinosa Yeison,Rosa Lorena [他],VACA Inmaculada,POLANCO Ruben,EYZAGUIRRE Jaime,LEVICAN Gloria,CHAVEZ Renato
Mycoscience 53(2), 152-155, 2012-03-25
NAID 10030550354