サーモプロテウス科
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- Thermoproteales、Thermoproteus
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出典(authority):フリー百科事典『ウィキペディア(Wikipedia)』「2015/10/16 00:20:43」(JST)
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Thermoproteaceae |
Scientific classification |
Domain: |
Archaea |
Phylum: |
Crenarchaeota |
Class: |
Thermoprotei |
Order: |
Thermoproteales |
Family: |
Thermoproteaceae
Zillig & Stetter 1982 emend. Burggraf et al. 1997 |
Genera |
- Caldivirga Itoh et al. 1999
- Pyrobaculum Huber et al. 1988
- Thermocladium Itoh et al. 1998
- Thermoproteus Zillig and Stetter 1982
- Vulcanisaeta Itoh et al. 2002
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In taxonomy, the Thermoproteaceae are a family of the Thermoproteales.[1]
Contents
- 1 Phylogeny
- 2 References
- 3 Further reading
- 3.1 Scientific journals
- 3.2 Scientific books
- 3.3 Scientific databases
- 4 External links
Phylogeny
The currently accepted taxonomy is based on the List of Prokaryotic names with Standing in Nomenclature (LPSN) [2] and National Center for Biotechnology Information (NCBI)[3] and the phylogeny is based on 16S rRNA-based LTP release 106 by The All-Species Living Tree Project [4]
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Caldivirga maquilingensis Itoh et al. 1999
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Thermocladium modestius Itoh et al. 1998
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Vulcanisaeta |
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?V. moutnovskia Prokofeva 2006
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V. distributa Itoh et al. 2002 (type sp.)
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V. souniana Itoh et al. 2002
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Thermoproteus |
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?T. uzoniensis ♦ Bonch-Osmolovskaya et al. 2001
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T. tenax Zillig and Stetter 1982 (type sp.)
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Pyrobaculum |
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?P. neutrophilum ♠ Hensel et al. 1996
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?P. islandicum Huber et al. 1988 (type sp.)
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?P. organotrophum Huber et al. 1988
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P. aerophilum Völkl et al. 1996
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P. calidifontis Amo et al. 2008
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Thermoproteus neutrophilus Stetter and Zillig 1989
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P. arsenaticum Huber et al. 2001
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P. oguniense Sako et al. 2001
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Notes:
♠ Strain found at the National Center for Biotechnology Information (NCBI) but not listed in the List of Prokaryotic names with Standing in Nomenclature (LPSN) ♦ Strain not found, not available or lost
References
- ^ See the NCBI webpage on Thermoproteaceae. Data extracted from the "NCBI taxonomy resources". National Center for Biotechnology Information. Retrieved 2007-03-19.
- ^ J.P. Euzéby. "Thermoproteaceae". List of Prokaryotic names with Standing in Nomenclature (LPSN) [1]. Retrieved 2011-11-17.
- ^ Sayers; et al. "Thermoproteaceae". National Center for Biotechnology Information (NCBI) taxonomy database [2]. Retrieved 2011-06-05.
- ^ All-Species Living Tree Project."16S rRNA-based LTP release 106 (full tree)" (PDF). Silva Comprehensive Ribosomal RNA Database [3]. Retrieved 2011-11-17.
Further reading
Scientific journals
- Judicial Commission of the International Committee on Systematics of Prokaryotes (2005). "The nomenclatural types of the orders Acholeplasmatales, Halanaerobiales, Halobacteriales, Methanobacteriales, Methanococcales, Methanomicrobiales, Planctomycetales, Prochlorales, Sulfolobales, Thermococcales, Thermoproteales and Verrucomicrobiales are the genera Acholeplasma, Halanaerobium, Halobacterium, Methanobacterium, Methanococcus, Methanomicrobium, Planctomyces, Prochloron, Sulfolobus, Thermococcus, Thermoproteus and Verrucomicrobium, respectively. Opinion 79". Int. J. Syst. Evol. Microbiol. 55 (Pt 1): 517–518. doi:10.1099/ijs.0.63548-0. PMID 15653928.
- Burggraf S; Huber H; Stetter KO (1997). "Reclassification of the crenarchael orders and families in accordance with 16S rRNA sequence data". Int. J. Syst. Bacteriol. 47 (3): 657–660. doi:10.1099/00207713-47-3-657. PMID 9226896.
- Zillig W; Stetter KO; Schafer W; Janekovic D; Wunderl S; Holz I; et al. (1981). "Thermoproteales: a novel type of extremely thermoacidophilic anaerobic archaebacteria isolated from Icelandic solfataras". Zentralbl. Mikrobiol. Parasitenkd. Infektionskr. Hyg. Abt. 1 Orig. C2: 205–227.
- Zillig W; Tu J; Holz I (1981). "Thermoproteales--a third order of thermoacidophilic archaebacteria". Nature 293 (5827): 85–86. doi:10.1038/293085a0. PMID 6791033.
Scientific books
Scientific databases
- PubMed references for Thermoproteaceae
- PubMed Central references for Thermoproteaceae
- Google Scholar references for Thermoproteaceae
External links
- NCBI taxonomy page for Thermoproteaceae
- Search Tree of Life taxonomy pages for Thermoproteaceae
- Search Species2000 page for Thermoproteaceae
- MicrobeWiki page for Thermoproteaceae
- LSPN page for Thermoproteaceae
English Journal
- Crystal structure of UDP-galactose 4-epimerase from the hyperthermophilic archaeon Pyrobaculum calidifontis.
- Sakuraba H, Kawai T, Yoneda K, Ohshima T.SourceDepartment of Applied Biological Science, Kagawa University, Ikenobe, Miki-cho, Kita-gun, Japan.
- Archives of biochemistry and biophysics.Arch Biochem Biophys.2011 Aug 15;512(2):126-34. doi: 10.1016/j.abb.2011.05.013. Epub 2011 May 27.
- The crystal structure of a highly thermostable UDP-galactose 4-epimerase (GalE) from the hyperthermophilic archaeon Pyrobaculum calidifontis was determined at a resolution of 1.8A. The asymmetric unit contained one subunit, and the functional dimer was generated by a crystallographic two-fold axis.
- PMID 21645492
- Complete genome sequence of the thermoacidophilic crenarchaeon Thermoproteus uzoniensis 768-20.
- Mardanov AV, Gumerov VM, Beletsky AV, Prokofeva MI, Bonch-Osmolovskaya EA, Ravin NV, Skryabin KG.SourceCentre Bioengineering, Russian Academy of Sciences, Prosp. 60-let Oktyabrya, bld. 7-1, Moscow, 117312, Russia.
- Journal of bacteriology.J Bacteriol.2011 Jun;193(12):3156-7. Epub 2011 Apr 8.
- Thermoproteus uzoniensis 768-20 is a thermoacidophilic anaerobic crenarchaeon isolated from a solfataric field in Kamchatka, Russia. The complete genome sequence reveals genes for protein and carbohydrate-active enzymes, beta-oxidation of fatty acids, the Embden-Meyerhof and Entner-Doudoroff pathway
- PMID 21478349
Japanese Journal
- 233 16S rRNA遺伝子塩基配列に基づくThermoproteaceae科古細菌の系統学的解析について
Related Links
- In taxonomy, the Thermoproteaceae are a family of the Thermoproteales. Contents. 1 References; 2 Further reading. 2.1 Scientific journals; 2.2 Scientific books; 2.3 Scientific databases. 3 External links. References. ^ See the NCBI webpage ...
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