PrepTutorEJDIC

dishonorable discharge

Wikipedia preview

出典(authority):フリー百科事典『ウィキペディア（Wikipedia）』「2016/08/16 05:49:38」(JST)

The DNA Data Bank of Japan (DDBJ) is a biological database that collects DNA sequences.^[1]^[2] It is located at the National Institute of Genetics (NIG) in the Shizuoka prefecture of Japan. It is also a member of the International Nucleotide Sequence Database Collaboration or INSDC. It exchanges its data with European Molecular Biology Laboratory at the European Bioinformatics Institute and with GenBank at the National Center for Biotechnology Information on a daily basis. Thus these three databanks contain the same data at any given time.

DDBJ began data bank activities in 1986 at NIG and remains the only nucleotide sequence data bank in Asia. Although DDBJ mainly receives its data from Japanese researchers, it can accept data from contributors from any other country. DDBJ is primarily funded by the Japanese Ministry of Education, Culture, Sports, Science and Technology (MEXT). DDBJ has an international advisory committee which consists of nine members, 3 members each from Europe, US, and Japan. This committee advises DDBJ about its maintenance, management and future plans once a year. Apart from this DDBJ also has an international collaborative committee which advises on various technical issues related to international collaboration and consists of working-level participants.

References

^ Tateno Y, Imanishi T, Miyazaki S, Fukami-Kobayashi K, Saitou N, Sugawara H, et al. (2002). "DNA Data Bank of Japan (DDBJ) for genome scale research in life science.". Nucleic Acids Res. 30 (1): 27–30. doi:10.1093/nar/30.1.27. PMC 99140. PMID 11752245.
^ Kaminuma E, Kosuge T, Kodama Y, et al. (January 2011). "DDBJ progress report". Nucleic Acids Res. 39 (Database issue): D22–7. doi:10.1093/nar/gkq1041. PMC 3013661. PMID 21062814.

External links

Official site
DDBJ entry in MetaBase.

Japanese Journal

e-Scienceと情報科学 : パラダイムシフトに乗る(<特集>e-Scienceとその周辺〜現状とこれから〜)

スティーン智子
情報の科学と技術 63(9), 358-362, 2013-09-01
1999年の,英国科学技術省のJohn Taylor所長の提唱以来,e-Scienceのアプローチが,色んな科学分野で,使われているという事が確認され,科学の方向性がさらに変わって来た。情報科学分野の方でもそれに見合う対応性が望まれる様になったので,アメリカでは,政府機関,大学,民間企業それぞれに,新しい動きが出て来ている。この論文では,いろんな例を上げて,e-Science時代に情報を提供するア …
NAID 110009636224

JSTバイオサイエンスデータベースセンターにおけるデータベース統合への取り組みと医学分野での利活用の紹介(<特集>医学系データベース)

大波純一,佐藤恵子,白木澤佳子 [他],高木利久
情報の科学と技術 63(5), 179-185, 2013-05-01
バイオサイエンスデータベースセンター(NBDC)は,独立行政法人科学技術振興機構(JST)に平成23年4月に設置された組織であり,ライフサイエンス分野のデータベースの統合を推進している。NBDCでは,Integbioデータベースカタログ,生命科学データベース横断検索,生命科学系データベースアーカイブなどのサービスや,ファンディングによって開発されたサービス(新着論文レビュー,領域融合レビュー,統合 …
NAID 110009603999

Detection and Identification of Genotypes of Prototheca zopfii in Clinical Samples by Quantitative PCR Analysis

Onozaki Masanobu,Makimura Koichi,Satoh Kazuo [他],Hasegawa Atsuhiko
Japanese Journal of Infectious Diseases 66(5), 383-390, 2013
… zopfii-specific primers 18PZF1 and 18PZR1 were generated on the basis of the alignment of the small subunit ribosomal DNA domain base sequences of the genera Chlorella and Prototheca obtained from DDBJ/EMBL/GenBank, and the TaqMan® MGB probe PZP1 was designed corresponding to this amplification region. …
NAID 130003381713

「DNA Data Bank of Japan」

DNA Data Bank of Japan
Content
Description	Japanese DNA data bank
Organisms	all
Contact
Research center	International Nucleotide Sequence Database Collaboration; National Institute of Genetics
Laboratory	Center for Information Biology and DNA Data Bank of Japan
Primary citation	PMID 11752245
Release date	1986
Access
Website	http://www.ddbj.nig.ac.jp

　　[★]

日本DNAデータバンク

関: DDBJ、GenBank、nucleic acid database

「nucleic acid database」

　　[★] 核酸データベース

関: DDBJ、DNA Data Bank of Japan、GenBank

「DD」

　　[★]

ディファレンシャルディスプレイ

関: differential display

[pmid11752245-1] Tateno Y, Imanishi T, Miyazaki S, Fukami-Kobayashi K, Saitou N, Sugawara H, et al. (2002). "DNA Data Bank of Japan (DDBJ) for genome scale research in life science.". Nucleic Acids Res. 30 (1): 27–30. doi:10.1093/nar/30.1.27. PMC 99140. PMID 11752245.

[pmid21062814-2] Kaminuma E, Kosuge T, Kodama Y, et al. (January 2011). "DDBJ progress report". Nucleic Acids Res. 39 (Database issue): D22–7. doi:10.1093/nar/gkq1041. PMC 3013661. PMID 21062814.

v t e Bioinformatics

Databases	Sequence databases: GenBank, European Nucleotide Archive and DNA Data Bank of Japan Secondary databases: UniProt, database of protein sequences grouping together Swiss-Prot, TrEMBL and Protein Information Resource Other databases: Protein Data Bank, Ensembl and InterPro Specialised genomic databases: BOLD, Saccharomyces Genome Database, FlyBase, VectorBase, WormBase, PHI-base, Arabidopsis Information Resource and Zebrafish Information Network

Software	BLAST Bowtie Clustal HMMER MUSCLE SAMtools TopHat

Other	Server: ExPASy Ontology: Gene Ontology

Institutions	European Bioinformatics Institute US National Center for Biotechnology Information Swiss Institute of Bioinformatics Japanese Institute of Genetics Broad Institute Wellcome Trust Sanger Institute

List of biological databases Sequencing Sequence database Sequence alignment Molecular phylogenetics

リンク元	「DNA Data Bank of Japan」「nucleic acid database」
関連記事	「DD」

匿名

検索

案内

案内

DDBJ

PrepTutorEJDIC

Wikipedia preview

wiki ja

概要

構成員

外部リンク

wiki en

See also