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出典(authority):フリー百科事典『ウィキペディア(Wikipedia)』「2015/04/25 19:47:15」(JST)
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Transcription factor A, mitochondrial |
Available structures |
PDB |
Ortholog search: PDBe, RCSB |
List of PDB id codes |
3FGH, 3TMM, 3TQ6, 4NNU, 4NOD
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Identifiers |
Symbols |
TFAM ; MTTF1; MTTFA; TCF6; TCF6L1; TCF6L2; TCF6L3 |
External IDs |
OMIM: 600438 MGI: 107810 HomoloGene: 31139 GeneCards: TFAM Gene |
Gene ontology |
Molecular function |
• chromatin binding
• sequence-specific DNA binding transcription factor activity
• protein binding
• DNA binding, bending
• heat shock protein binding
• poly(A) RNA binding
• mitochondrial light strand promoter sense binding
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Cellular component |
• nucleus
• mitochondrion
• mitochondrial matrix
• mitochondrial nucleoid
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Biological process |
• DNA-dependent DNA replication
• regulation of transcription from RNA polymerase I promoter
• transcription from mitochondrial promoter
• transcription initiation from mitochondrial promoter
• gene expression
• mitochondrial respiratory chain complex assembly
• positive regulation of transcription, DNA-templated
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Sources: Amigo / QuickGO |
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RNA expression pattern |
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More reference expression data |
Orthologs |
Species |
Human |
Mouse |
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Entrez |
7019 |
21780 |
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Ensembl |
ENSG00000108064 |
ENSMUSG00000003923 |
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UniProt |
Q00059 |
P40630 |
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RefSeq (mRNA) |
NM_001270782 |
NM_009360 |
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RefSeq (protein) |
NP_001257711 |
NP_033386 |
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Location (UCSC) |
Chr 10:
60.14 – 60.16 Mb |
Chr 10:
71.23 – 71.24 Mb |
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PubMed search |
[1] |
[2] |
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Mitochondrial transcription factor A, abbreviated as TFAM or mtTFA, is a protein that in humans is encoded by the TFAM gene.[1][2]
Contents
- 1 Function
- 2 Interactions
- 3 References
- 4 Further reading
Function
This gene encodes a mitochondrial transcription factor that is a key activator of mitochondrial transcription as well as a participant in mitochondrial genome replication. TFAM bends mitochondrial promoter DNA to aid transcription of the mitochondrial genome. Studies in mice have demonstrated that this gene product is required to regulate the mitochondrial genome copy number and is essential for embryonic development. A mouse model for Kearns-Sayre syndrome was produced when expression of this gene was eliminated by targeted disruption in heart and muscle cells.[2]
Interactions
TFAM has been shown to interact with TFB1M.[3]
References
- ^ Tiranti V, Rossi E, Ruiz-Carrillo A, Rossi G, Rocchi M, DiDonato S et al. (Jul 1995). "Chromosomal localization of mitochondrial transcription factor A (TCF6), single-stranded DNA-binding protein (SSBP), and endonuclease G (ENDOG), three human housekeeping genes involved in mitochondrial biogenesis". Genomics 25 (2): 559–64. doi:10.1016/0888-7543(95)80058-T. PMID 7789991.
- ^ a b "Entrez Gene: TFAM transcription factor A, mitochondrial".
- ^ McCulloch V, Shadel GS (Aug 2003). "Human mitochondrial transcription factor B1 interacts with the C-terminal activation region of h-mtTFA and stimulates transcription independently of its RNA methyltransferase activity". Mol. Cell. Biol. 23 (16): 5816–24. doi:10.1128/MCB.23.16.5816-5824.2003. PMC 166325. PMID 12897151.
Further reading
- Tominaga K, Akiyama S, Kagawa Y, Ohta S (1992). "Upstream region of a genomic gene for human mitochondrial transcription factor 1.". Biochim. Biophys. Acta 1131 (2): 217–9. doi:10.1016/0167-4781(92)90082-b. PMID 1610904.
- Fisher RP, Lisowsky T, Parisi MA, Clayton DA (1992). "DNA wrapping and bending by a mitochondrial high mobility group-like transcriptional activator protein.". J. Biol. Chem. 267 (5): 3358–67. PMID 1737790.
- Parisi MA, Clayton DA (1991). "Similarity of human mitochondrial transcription factor 1 to high mobility group proteins.". Science 252 (5008): 965–9. doi:10.1126/science.2035027. PMID 2035027.
- Tominaga K, Hayashi J, Kagawa Y, Ohta S (1993). "Smaller isoform of human mitochondrial transcription factor 1: its wide distribution and production by alternative splicing.". Biochem. Biophys. Res. Commun. 194 (1): 544–51. doi:10.1006/bbrc.1993.1854. PMID 8333869.
- Larsson NG, Oldfors A, Garman JD, Barsh GS, Clayton DA (1997). "Down-regulation of mitochondrial transcription factor A during spermatogenesis in humans.". Hum. Mol. Genet. 6 (2): 185–91. doi:10.1093/hmg/6.2.185. PMID 9063738.
- Lezza AM, Pesce V, Cormio A, Fracasso F, Vecchiet J, Felzani G et al. (2001). "Increased expression of mitochondrial transcription factor A and nuclear respiratory factor-1 in skeletal muscle from aged human subjects.". FEBS Lett. 501 (1): 74–8. doi:10.1016/S0014-5793(01)02628-X. PMID 11457459.
- Takamatsu C, Umeda S, Ohsato T, Ohno T, Abe Y, Fukuoh A et al. (2002). "Regulation of mitochondrial D-loops by transcription factor A and single-stranded DNA-binding protein.". EMBO Rep. 3 (5): 451–6. doi:10.1093/embo-reports/kvf099. PMC 1084112. PMID 11964388.
- Falkenberg M, Gaspari M, Rantanen A, Trifunovic A, Larsson NG, Gustafsson CM (2002). "Mitochondrial transcription factors B1 and B2 activate transcription of human mtDNA.". Nat. Genet. 31 (3): 289–94. doi:10.1038/ng909. PMID 12068295.
- Reyes A, Mezzina M, Gadaleta G (2002). "Human mitochondrial transcription factor A (mtTFA): gene structure and characterization of related pseudogenes.". Gene 291 (1-2): 223–32. doi:10.1016/S0378-1119(02)00600-5. PMID 12095695.
- Yoshida Y, Izumi H, Ise T, Uramoto H, Torigoe T, Ishiguchi H et al. (2002). "Human mitochondrial transcription factor A binds preferentially to oxidatively damaged DNA.". Biochem. Biophys. Res. Commun. 295 (4): 945–51. doi:10.1016/S0006-291X(02)00757-X. PMID 12127986.
- Garrido N, Griparic L, Jokitalo E, Wartiovaara J, van der Bliek AM, Spelbrink JN (2003). "Composition and dynamics of human mitochondrial nucleoids.". Mol. Biol. Cell 14 (4): 1583–96. doi:10.1091/mbc.E02-07-0399. PMC 153124. PMID 12686611.
- Yoshida Y, Izumi H, Torigoe T, Ishiguchi H, Itoh H, Kang D et al. (2003). "P53 physically interacts with mitochondrial transcription factor A and differentially regulates binding to damaged DNA.". Cancer Res. 63 (13): 3729–34. PMID 12839966.
- McCulloch V, Shadel GS (2003). "Human mitochondrial transcription factor B1 interacts with the C-terminal activation region of h-mtTFA and stimulates transcription independently of its RNA methyltransferase activity.". Mol. Cell. Biol. 23 (16): 5816–24. doi:10.1128/MCB.23.16.5816-5824.2003. PMC 166325. PMID 12897151.
- Deschauer M, Kiefer R, Blakely EL, He L, Zierz S, Turnbull DM et al. (2003). "A novel Twinkle gene mutation in autosomal dominant progressive external ophthalmoplegia.". Neuromuscul. Disord. 13 (7-8): 568–72. doi:10.1016/S0960-8966(03)00071-3. PMID 12921794.
- Günther C, von Hadeln K, Müller-Thomsen T, Alberici A, Binetti G, Hock C et al. (2005). "Possible association of mitochondrial transcription factor A (TFAM) genotype with sporadic Alzheimer disease.". Neurosci. Lett. 369 (3): 219–23. doi:10.1016/j.neulet.2004.07.070. PMID 15464268.
- Kanki T, Ohgaki K, Gaspari M, Gustafsson CM, Fukuoh A, Sasaki N et al. (2004). "Architectural role of mitochondrial transcription factor A in maintenance of human mitochondrial DNA.". Mol. Cell. Biol. 24 (22): 9823–34. doi:10.1128/MCB.24.22.9823-9834.2004. PMC 525493. PMID 15509786.
- Cam H, Balciunaite E, Blais A, Spektor A, Scarpulla RC, Young R et al. (2004). "A common set of gene regulatory networks links metabolism and growth inhibition.". Mol. Cell 16 (3): 399–411. doi:10.1016/j.molcel.2004.09.037. PMID 15525513.
English Journal
- Nuclear factor erythroid-derived 2-like 2 (NFE2L2, Nrf2) mediates exercise-induced mitochondrial biogenesis and the anti-oxidant response in mice.
- Merry TL1,2, Ristow M3.
- The Journal of physiology.J Physiol.2016 Sep 15;594(18):5195-207. doi: 10.1113/JP271957. Epub 2016 May 27.
- KEY POINTS: Reactive oxygen species (ROS) and nitric oxide (NO) regulate exercise-induced nuclear factor erythroid 2-related factor 2 (NFE2L2) expression in skeletal muscle. NFE2L2 is required for acute exercise-induced increases in skeletal muscle mitochondrial biogenesis genes, such as nuclear res
- PMID 27094017
- T-2 toxin inhibits murine ES cells cardiac differentiation and mitochondrial biogenesis by ROS and p-38 MAPK-mediated pathway.
- Fang H1, Cong L2, Zhi Y3, Xu H3, Jia X4, Peng S5.
- Toxicology letters.Toxicol Lett.2016 Sep 6;258:259-66. doi: 10.1016/j.toxlet.2016.06.2103. Epub 2016 Jun 27.
- OBJECTIVE: To investigate the effect of T-2 toxin on murine embryonic stem cells (ESCs) cardiac differentiation and mitochondrial biogenesis in vitro.METHODS: Cardiac differentiation of the mouse ESCs was initiated by embryoid bodies (EBs) formation in hanging drops. EBs were exposed to 0.5ng/ml T-2
- PMID 27363784
Japanese Journal
- Protective Effect of Demethylation Treatment on Cigarette Smoke Extract–Induced Mouse Emphysema Model
- Zhang Hongliang,Chen Ping,Zeng Huihui,Zhang Yan,Peng Hong,Chen Yan,He Zhihui
- Journal of Pharmacological Sciences 123(2), 159-166, 2013
- … The mitochondrial transcription factor A (mtTFA) promoter methylation increased over 4-fold in the CSE group compared with the control group, which was reversed by AZA. … The mtTFA and the cytochrome c oxidase subunit II (COX II) mRNA and protein levels were decreased approximately 3-fold in the CSE group compared with the control group, which was largely restored by AZA. …
- NAID 130003382587
- PS-148-6 膵癌におけるmitochondrialtranscription factor A(mtTFA)発現についての検討 : 予後因子としての可能性(PS-148 膵 基礎-2,ポスターセッション,第112回日本外科学会定期学術集会)
- 山内 潤身,皆川 紀剛,井上 譲,金光 秀一,中山 善文,山口 幸二
- 日本外科学会雑誌 113(臨時増刊号_2), 788, 2012-03-05
- NAID 110009549877
Related Links
- 1. Diabetes Res Clin Pract. 2001 Dec;54 Suppl 2:S3-9. Mitochondrial transcription factor A (mtTFA) and diabetes. Choi YS(1), Kim S, Pak YK. Author information: (1)Division of Metabolic Disease Research ...
- Looking for online definition of mtTFA in the Medical Dictionary? mtTFA explanation free. What is mtTFA? Meaning of mtTFA medical term. What does mtTFA mean? MtTFA | definition of mtTFA by Medical dictionary Search / ? ...
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