カルネキシン
Wikipedia preview
出典(authority):フリー百科事典『ウィキペディア(Wikipedia)』「2016/06/28 13:30:21」(JST)
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CANX |
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Identifiers |
Aliases |
CANX, CNX, IP90, P90, calnexin |
External IDs |
OMIM: 114217 MGI: 88261 HomoloGene: 1324 GeneCards: 821 |
Gene ontology |
Molecular function |
• calcium ion binding
• apolipoprotein binding
• unfolded protein binding
• glycoprotein binding
• metal ion binding
• protein binding
• poly(A) RNA binding
• ionotropic glutamate receptor binding
• carbohydrate binding
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Cellular component |
• cytoplasm
• integral component of membrane
• ER-mitochondrion membrane contact site
• rough endoplasmic reticulum
• ribosome
• endoplasmic reticulum lumen
• endoplasmic reticulum membrane
• membrane
• melanosome
• myelin sheath
• dendritic spine
• smooth endoplasmic reticulum
• protein complex
• axon
• neuronal cell body
• endoplasmic reticulum
• dendrite cytoplasm
• integral component of lumenal side of endoplasmic reticulum membrane
• extracellular exosome
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Biological process |
• cellular protein metabolic process
• antigen processing and presentation of exogenous peptide antigen via MHC class II
• post-translational protein modification
• antigen processing and presentation of peptide antigen via MHC class I
• aging
• protein folding in endoplasmic reticulum
• protein N-linked glycosylation via asparagine
• protein secretion
• clathrin-mediated endocytosis
• synaptic vesicle endocytosis
• protein folding
• chaperone-mediated protein folding
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Sources:Amigo / QuickGO |
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RNA expression pattern |
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More reference expression data |
Orthologs |
Species |
Human |
Mouse |
Entrez |
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Ensembl |
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UniProt |
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RefSeq (mRNA) |
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NM_001110499
NM_001110500
NM_007597
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RefSeq (protein) |
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NP_001019820.1
NP_001737.1
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NP_001103969.1
NP_001103970.1
NP_031623.1
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Location (UCSC) |
Chr 5: 179.68 – 179.73 Mb |
Chr 11: 50.29 – 50.33 Mb |
PubMed search |
[1] |
[2] |
Wikidata |
View/Edit Human |
View/Edit Mouse |
Calnexin (CNX) is a 67kDa integral protein (that appears variously as a 90kDa, 80kDa or 75kDa band on western blotting depending on the source of the antibody) of the endoplasmic reticulum (ER). It consists of a large (50 kDa) N-terminal calcium-binding lumenal domain, a single transmembrane helix and a short (90 residues), acidic cytoplasmic tail.
Contents
- 1 Function
- 2 Cofactors
- 3 References
- 4 External links
- 5 Further reading
Function
Calnexin is a chaperone, characterized by assisting protein folding and quality control, ensuring that only properly folded and assembled proteins proceed further along the secretory pathway. It specifically acts to retain unfolded or unassembled N-linked glycoproteins in the ER. Calnexin binds only those N-glycoproteins that have GlcNAc2Man9Glc1 oligosaccharides. These monoglucosylated oligosaccharides result from the trimming of two glucose residues by the sequential action of two glucosidases, I and II. Glucosidase II can also remove the third and last glucose residue. If the glycoprotein is not properly folded, an enzyme called UGGT (for UDP-glucose:glycoprotein glucosyltransferase) will add the glucose residue back onto the oligosaccharide thus regenerating the glycoprotein's ability to bind to calnexin. The improperly-folded glycoprotein chain thus loiters in the ER, risking the encounter with MNS1 (alpha-mannosidase), which eventually sentences the underperforming glycoprotein to degradation by removing one of the nine mannose residues. If the protein is correctly translated, the chance of it being correctly folded before it encounters MNS1 is high.
Calnexin also functions as a chaperone for the folding of MHC class I α-chain in the membrane of the ER. As newly synthesized MHC class I α-chains enter the endoplasmic reticulum, calnexin binds on to them retaining them in a partly folded state.[1] After the β2-microglobulin binds to the MHC class I peptide-loading complex (PLC), calreticulin and ERp57 take over the job of chaperoning the MHC class I protein while the tapasin links the complex to the Transporter associated with antigen processing (TAP) complex. This association prepares the MHC class I for binding an antigen for presentation on the cell surface.
Cofactors
ATP and calcium ions are cofactors involved in substrate binding for calnexin.
References
- ^ Murphy K (2011). Janeway's Immunobiology (8th ed.). Oxford: Taylor & Francis. ISBN 978-0815342434.
External links
- Calnexin at the US National Library of Medicine Medical Subject Headings (MeSH)
Further reading
- Benyair R, Ron E, Lederkremer GZ (2011). "Protein quality control, retention, and degradation at the endoplasmic reticulum". International Review of Cell and Molecular Biology 292: 197–280. doi:10.1016/B978-0-12-386033-0.00005-0. PMID 22078962.
- Del Bem LE (Feb 2011). "The evolutionary history of calreticulin and calnexin genes in green plants". Genetica 139 (2): 225–9. doi:10.1007/s10709-010-9544-y. PMID 21222018.
- Kleizen B, Braakman I (Aug 2004). "Protein folding and quality control in the endoplasmic reticulum". Current Opinion in Cell Biology 16 (4): 343–9. doi:10.1016/j.ceb.2004.06.012. PMID 15261665.
- Rasmussen HH, van Damme J, Puype M, Gesser B, Celis JE, Vandekerckhove J (Dec 1992). "Microsequences of 145 proteins recorded in the two-dimensional gel protein database of normal human epidermal keratinocytes". Electrophoresis 13 (12): 960–9. doi:10.1002/elps.11501301199. PMID 1286667.
- Galvin K, Krishna S, Ponchel F, Frohlich M, Cummings DE, Carlson R, Wands JR, Isselbacher KJ, Pillai S, Ozturk M (Sep 1992). "The major histocompatibility complex class I antigen-binding protein p88 is the product of the calnexin gene". Proceedings of the National Academy of Sciences of the United States of America 89 (18): 8452–6. doi:10.1073/pnas.89.18.8452. PMC 49938. PMID 1326756.
- Pind S, Riordan JR, Williams DB (Apr 1994). "Participation of the endoplasmic reticulum chaperone calnexin (p88, IP90) in the biogenesis of the cystic fibrosis transmembrane conductance regulator". The Journal of Biological Chemistry 269 (17): 12784–8. PMID 7513695.
- Honoré B, Rasmussen HH, Celis A, Leffers H, Madsen P, Celis JE (1994). "The molecular chaperones HSP28, GRP78, endoplasmin, and calnexin exhibit strikingly different levels in quiescent keratinocytes as compared to their proliferating normal and transformed counterparts: cDNA cloning and expression of calnexin". Electrophoresis 15 (3-4): 482–90. doi:10.1002/elps.1150150166. PMID 8055875.
- Tjoelker LW, Seyfried CE, Eddy RL, Byers MG, Shows TB, Calderon J, Schreiber RB, Gray PW (Mar 1994). "Human, mouse, and rat calnexin cDNA cloning: identification of potential calcium binding motifs and gene localization to human chromosome 5". Biochemistry 33 (11): 3229–36. doi:10.1021/bi00177a013. PMID 8136357.
- Lenter M, Vestweber D (Apr 1994). "The integrin chains beta 1 and alpha 6 associate with the chaperone calnexin prior to integrin assembly". The Journal of Biological Chemistry 269 (16): 12263–8. PMID 8163531.
- Rajagopalan S, Xu Y, Brenner MB (Jan 1994). "Retention of unassembled components of integral membrane proteins by calnexin". Science 263 (5145): 387–90. doi:10.1126/science.8278814. PMID 8278814.
- David V, Hochstenbach F, Rajagopalan S, Brenner MB (May 1993). "Interaction with newly synthesized and retained proteins in the endoplasmic reticulum suggests a chaperone function for human integral membrane protein IP90 (calnexin)". The Journal of Biological Chemistry 268 (13): 9585–92. PMID 8486646.
- Bellovino D, Morimoto T, Tosetti F, Gaetani S (Jan 1996). "Retinol binding protein and transthyretin are secreted as a complex formed in the endoplasmic reticulum in HepG2 human hepatocarcinoma cells". Experimental Cell Research 222 (1): 77–83. doi:10.1006/excr.1996.0010. PMID 8549676.
- Otteken A, Moss B (Jan 1996). "Calreticulin interacts with newly synthesized human immunodeficiency virus type 1 envelope glycoprotein, suggesting a chaperone function similar to that of calnexin". The Journal of Biological Chemistry 271 (1): 97–103. doi:10.1074/jbc.271.1.97. PMID 8550632.
- Devergne O, Hummel M, Koeppen H, Le Beau MM, Nathanson EC, Kieff E, Birkenbach M (Feb 1996). "A novel interleukin-12 p40-related protein induced by latent Epstein-Barr virus infection in B lymphocytes". Journal of Virology 70 (2): 1143–53. PMC 189923. PMID 8551575.
- Andersson B, Wentland MA, Ricafrente JY, Liu W, Gibbs RA (Apr 1996). "A "double adaptor" method for improved shotgun library construction". Analytical Biochemistry 236 (1): 107–13. doi:10.1006/abio.1996.0138. PMID 8619474.
- van Leeuwen JE, Kearse KP (Apr 1996). "Calnexin associates exclusively with individual CD3 delta and T cell antigen receptor (TCR) alpha proteins containing incompletely trimmed glycans that are not assembled into multisubunit TCR complexes". The Journal of Biological Chemistry 271 (16): 9660–5. doi:10.1074/jbc.271.16.9660. PMID 8621641.
- Oliver JD, Hresko RC, Mueckler M, High S (Jun 1996). "The glut 1 glucose transporter interacts with calnexin and calreticulin". The Journal of Biological Chemistry 271 (23): 13691–6. doi:10.1074/jbc.271.23.13691. PMID 8662691.
- Li Y, Bergeron JJ, Luo L, Ou WJ, Thomas DY, Kang CY (Sep 1996). "Effects of inefficient cleavage of the signal sequence of HIV-1 gp 120 on its association with calnexin, folding, and intracellular transport". Proceedings of the National Academy of Sciences of the United States of America 93 (18): 9606–11. doi:10.1073/pnas.93.18.9606. PMC 38475. PMID 8790377.
- Trombetta ES, Simons JF, Helenius A (Nov 1996). "Endoplasmic reticulum glucosidase II is composed of a catalytic subunit, conserved from yeast to mammals, and a tightly bound noncatalytic HDEL-containing subunit". The Journal of Biological Chemistry 271 (44): 27509–16. doi:10.1074/jbc.271.44.27509. PMID 8910335.
- Tatu U, Helenius A (Feb 1997). "Interactions between newly synthesized glycoproteins, calnexin and a network of resident chaperones in the endoplasmic reticulum". The Journal of Cell Biology 136 (3): 555–65. doi:10.1083/jcb.136.3.555. PMC 2134297. PMID 9024687.
- Wiest DL, Bhandoola A, Punt J, Kreibich G, McKean D, Singer A (Mar 1997). "Incomplete endoplasmic reticulum (ER) retention in immature thymocytes as revealed by surface expression of "ER-resident" molecular chaperones". Proceedings of the National Academy of Sciences of the United States of America 94 (5): 1884–9. doi:10.1073/pnas.94.5.1884. PMC 20012. PMID 9050874.
- Yu W, Andersson B, Worley KC, Muzny DM, Ding Y, Liu W, Ricafrente JY, Wentland MA, Lennon G, Gibbs RA (Apr 1997). "Large-scale concatenation cDNA sequencing". Genome Research 7 (4): 353–8. doi:10.1101/gr.7.4.353. PMC 139146. PMID 9110174.
PDB gallery
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1jhn: Crystal Structure of the Lumenal Domain of Calnexin
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Cell signaling: calcium signaling and calcium metabolism
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Cell membrane |
Ion pumps
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- SERCA
- Sodium-calcium exchanger
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Cell membrane calcium channels
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- VDCC
- TRP
- NMDA receptor
- AMPA receptor
- 5-HT3 receptor
- P2X purinoreceptor
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Adhesion molecules
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Other
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Intracellular signaling
& calc. regulation |
Second messengers
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Store gates
(ligand-gated calcium channel)
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Molecular switches, and kinases
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- Troponin C
- Calmodulin
- CaM kinases
- PKC
- NCS
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Chelators and calcium sensors
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- Calbindin
- S100
- pervalbumin
- Calretinin
- Calsequestrin
- Sarcalumenin
- Phospholamban
- Synaptotagmins
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Proteases
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Cytoskeleton remodeling proteins
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Chaperones
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Other
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Calcium-binding
protein domains |
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Extracellular ligands |
- Parathyroid hormone
- Calcitonin
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Calcium-binding proteins |
Intracellular calcium-sensing proteins
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- Calmodulin
- Calnexin
- Calreticulin
- Gelsolin
- neuronal
- Hippocalcin
- Neurocalcin
- Recoverin
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Membrane protein
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- Vitamin D-dependent calcium-binding protein/Calbindin
- Calexcitin
- Calsequestrin
- Osteocalcin
- Osteonectin
- S-100
- Synaptotagmin
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Cytoskeleton
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Extracellular matrix
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Protein: lectins
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Animal |
C-type lectins
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- Asialoglycoprotein receptor
- KLRD1
- Collectin
- Mannose receptor
- proteochondroitin sulfate
- Aggrecan
- Versican
- Brevican
- Neurocan
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Other
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- Calnexin
- Calreticulin
- CD22
- CD33
- Galectin
- Myelin-associated glycoprotein
- N-Acetylglucosamine receptor
- Selectin
- Sialoadhesin
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Plant |
- Toxalbumins
- Mitogens
- Concanavalin A
- Phytohaemagglutinin
- Pokeweed mitogen
- Legume lectin
- BanLec
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Protein: cell membrane proteins (other than Cell surface receptor, enzymes, and cytoskeleton)
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Arrestin |
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Membrane-spanning 4A |
- MS4A1
- MS4A2
- MS4A3
- MS4A4A
- MS4A4E
- MS4A5
- MS4A6A
- MS4A6E
- MS4A7
- MS4A8B
- MS4A9
- MS4A10
- MS4A12
- MS4A13
- MS4A14
- MS4A15
- MS4A18
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Myelin |
- Myelin basic protein
- Myelin proteolipid protein
- Myelin oligodendrocyte glycoprotein
- Myelin-associated glycoprotein
- Myelin protein zero
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Pulmonary surfactant |
- Pulmonary surfactant-associated protein B
- Pulmonary surfactant-associated protein C
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Tetraspanin |
- TSPAN1
- TSPAN2
- TSPAN3
- TSPAN4
- TSPAN5
- TSPAN6
- TSPAN7
- TSPAN8
- TSPAN9
- TSPAN10
- TSPAN11
- TSPAN12
- TSPAN13
- TSPAN14
- TSPAN15
- TSPAN16
- TSPAN17
- TSPAN18
- TSPAN19
- TSPAN20
- TSPAN21
- TSPAN22
- TSPAN23
- TSPAN24
- TSPAN25
- TSPAN26
- TSPAN27
- TSPAN28
- TSPAN29
- TSPAN30
- TSPAN31
- TSPAN32
- TSPAN33
- TSPAN34
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Other/ungrouped |
- Calnexin
- LDL-receptor-related protein-associated protein
- Neurofibromin 2
- Presenilin
- HFE
- Phospholipid transfer proteins
- Dysferlin
- STRC
- OTOF
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see also other cell membrane protein disorders
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UpToDate Contents
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- 1. 抗原提示細胞 antigen presenting cells
English Journal
- The protein ERp57 contributes to EGF receptor signaling and internalization in MDA-MB-468 breast cancer cells.
- Gaucci E, Altieri F, Turano C, Chichiarelli S.SourceDepartment of Biochemical Sciences "A. Rossi Fanelli", Sapienza University of Rome, Piazzale Aldo Moro 5, Rome, 00185, Italy; Istituto Pasteur-Fondazione Cenci Bolognetti, Sapienza University of Rome, Piazzale Aldo Moro 5, Rome, 00185, Italy.
- Journal of cellular biochemistry.J Cell Biochem.2013 Nov;114(11):2461-70. doi: 10.1002/jcb.24590.
- The disulfide isomerase ERp57 is a soluble protein mainly located in the endoplasmic reticulum, where it acts in the quality control of newly synthesized glycoproteins, in association with calreticulin and calnexin. It has been also detected in other cell compartments, such as the cytosol, the plasm
- PMID 23696074
- Deficiency of α-glucosidase I alters glycoprotein glycosylation and lifespan in Caenorhabditis elegans.
- Katoh T, Takase J, Tani Y, Amamoto R, Aoshima N, Tiemeyer M, Yamamoto K, Ashida H.SourceComplex Carbohydrate Research Center, The University of Georgia, Athens, GA 30602-4712, USA.
- Glycobiology.Glycobiology.2013 Oct;23(10):1142-51. doi: 10.1093/glycob/cwt051. Epub 2013 Jul 7.
- Endoplasmic reticulum (ER) α-glucosidase I is an enzyme that trims the distal α1,2-linked glucose (Glc) residue from the Glc3Man9GlcNAc2 oligosaccharide following its addition to nascent glycoproteins in the initial step of processing. This reaction is critical to the subsequent processing of N-gl
- PMID 23836288
- Modulation of endoplasmic reticulum chaperone GRP78 by high glucose in hippocampus of streptozotocin-induced diabetic mice and C6 astrocytic cells.
- K Wong DP, T Chu JM, L Hung VK, M Lee DK, K Cheng CH, L Yung KK, M Yue KK.SourceSchool of Chinese Medicine, Hong Kong Baptist University, Hong Kong.
- Neurochemistry international.Neurochem Int.2013 Sep 19. pii: S0197-0186(13)00237-4. doi: 10.1016/j.neuint.2013.09.010. [Epub ahead of print]
- Diabetes mellitus is known to increase the risk of neurodegeneration, and both diseases are reported to be linked to dysfunction of endoplasmic reticulum (ER). Astrocytes are important in the defense mechanism of central nervous system (CNS), with great ability of tolerating accumulation of toxic su
- PMID 24056253
Japanese Journal
- Carbon and nitrogen depletion-induced nucleophagy and selective autophagic sequestration of a whole nucleus in multinucleate cells of the filamentous fungus <i>Aspergillus oryzae</i>
- Effect of ionomycin on interaction of calnexin with vesicular stomatitis virus glycoprotein is cell type-specific
- Beneficial impact of Gpnmb and its significance as a biomarker in nonalcoholic steatohepatitis
Related Links
- カルネキシン/カルレティキュリン: カルネキシン/カルレティキュリン サイクルによる糖タンパク質の折りたたみ カルネキシン(CNX)とカルレティキュリン(CRT)は互いに相同性のあるレクチン様分子シャペロンである。
- 米国CST社の日本法人CSTジャパン株式会社【公式サイト】Calnexin Antibodyページ。高品質の研究用試薬、米国本社の開発研究者による技術的サポートをご提供しております。
Related Pictures