ーモコッカス科

関: Thermococcales、Thermococcus

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出典(authority):フリー百科事典『ウィキペディア（Wikipedia）』「2014/09/04 05:41:58」(JST)

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In taxonomy, the Thermococcaceae are a family of the Thermococcales.^[1]

Phylogeny

The currently accepted taxonomy is based on the List of Prokaryotic names with Standing in Nomenclature (LPSN)^[2] and National Center for Biotechnology Information (NCBI)^[3] and the phylogeny is based on 16S rRNA-based LTP release 106 by 'The All-Species Living Tree' Project.^[4]

Palaeococcus

	P. ferrophilus Takai et al. 2000 (type sp.)

	P. helgesonii Amend et al. 2006

?Thermococcus litoralis Neuner et al. 2001

?Thermococcus marinus ♠ Jolivet et al. 2004

?Thermococcus mexicalis ♠ Antoine 1996

?Thermococcus nautilus ♠ Soler et al. 2007

?Thermococcus onnurineus ♠ Bae et al. 2006

?Thermococcus radiotolerans ♠ Jolivet et al. 2004

?Thermococcus waimanguensis ♠ Goetz & Morgan 1999

Thermococcus aegaeus Arab et al. 2000

	Thermococcus alcaliphilus Keller et al. 1997

	Thermococcus sibiricus Miroshnichenko et al. 2001

Thermococcus aggregans Canganella et al. 1998

Thermococcus barophilus Marteinsson et al. 1999

Pyrococcus

?P. abyssi ♠ Erauso et al. 1993

?P. woesei ♦ Zillig 1988

?P. yayanosii Birrien et al. 2011

	Thermococcus chitonophagus Huber and Stetter 1996

	P. glycovorans Barbier et al. 1999

	P. furiosus Fiala and Stetter 1986 (type sp.)

	P. horikoshii González et al. 1999

Thermococcus

T. gorgonarius Miroshnichenko et al. 1998

T. guaymasensis Canganella et al. 1998

	T. fumicolans Godfroy and Meunier 1996

	T. gammatolerans Jolivet et al. 2003

T. stetteri Miroshnichenko 1990

	T. kodakarensis Atomi et al. 2005

	T. peptonophilus González et al. 1996

T. profundus Kobayashi and Horikoshi 1995

T. acidaminovorans Dirmeier et al. 2001

T. pacificus Miroshnichenko et al. 1998

	T. waiotapuensis González et al. 2001

	T. zilligii Ronimus et al. 1999

T. atlanticus Cambon-Bonavita et al. 2004

	T. celericrescens Kuwabara et al. 2007

	T. siculi Grote et al. 2000

T. coalescens Kuwabara et al. 2005

T. thioreducens Pikuta et al. 2007

	T. hydrothermalis Godfroy et al. 1997

	T. celer Zillig 1983 (type sp.)

	T. barossii Duffaud et al. 2005

Notes:
♠ Strains found at the National Center for Biotechnology Information (NCBI) but not listed in the List of Prokaryotic names with Standing in Nomenclature (LPSN).
♦ Type strain lost or not available

References

^ See the NCBI webpage on Thermococcaceae. Data extracted from the "NCBI taxonomy resources". National Center for Biotechnology Information. Retrieved 2007-03-19.
^ J.P. Euzéby. "Thermococcaceae". List of Prokaryotic names with Standing in Nomenclature (LPSN) [1]. Retrieved 2011-11-17.
^ Sayers et al. "Thermococcaceae". National Center for Biotechnology Information (NCBI) taxonomy database [2]. Retrieved 2011-06-05.
^ All-Species Living Tree Project."16S rRNA-based LTP release 106 (full tree)". Silva Comprehensive Ribosomal RNA Database [3]. Retrieved 2011-11-17.

External links

NCBI taxonomy page for Thermococcaceae
Search Tree of Life taxonomy pages for Thermococcaceae
Search Species2000 page for Thermococcaceae
MicrobeWiki page for Thermococcaceae
LSPN page for Thermococcaceae

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English Journal

Thermococcus nautili sp. nov., a hyperthermophilic archaeon isolated from a hydrothermal deep-sea vent.

Gorlas A1, Croce O, Oberto J, Gauliard E, Forterre P, Marguet E.
International journal of systematic and evolutionary microbiology.Int J Syst Evol Microbiol.2014 May;64(Pt 5):1802-10. doi: 10.1099/ijs.0.060376-0. Epub 2014 Feb 20.
Thermococcus nautili, strain 30-1T (formerly reported as Thermococcus nautilus), was isolated from a hydrothermal chimney sample collected from the East Pacific Rise at a depth of 2633 m on the 'La chainette PP57' area. Cells were motile, irregular cocci with a polar tuft of flagella (0.8-1.5 µm) a
PMID 24556637

Identification of a novel aminopropyltransferase involved in the synthesis of branched-chain polyamines in hyperthermophiles.

Okada K1, Hidese R, Fukuda W, Niitsu M, Takao K, Horai Y, Umezawa N, Higuchi T, Oshima T, Yoshikawa Y, Imanaka T, Fujiwara S.
Journal of bacteriology.J Bacteriol.2014 May;196(10):1866-76. doi: 10.1128/JB.01515-14. Epub 2014 Mar 7.
Longer- and/or branched-chain polyamines are unique polycations found in thermophiles. N(4)-aminopropylspermine is considered a major polyamine in Thermococcus kodakarensis. To determine whether a quaternary branched penta-amine, N(4)-bis(aminopropyl)spermidine, an isomer of N(4)-aminopropylspermine
PMID 24610711

Enzymatic and structural characterization of an archaeal thiamin phosphate synthase.

Hayashi M1, Kobayashi K2, Esaki H3, Konno H4, Akaji K2, Tazuya K5, Yamada K1, Nakabayashi T1, Nosaka K6.
Biochimica et biophysica acta.Biochim Biophys Acta.2014 Apr;1844(4):803-9. doi: 10.1016/j.bbapap.2014.02.017. Epub 2014 Feb 27.
Studies on thiamin biosynthesis have so far been achieved in eubacteria, yeast and plants, in which the thiamin structure is formed as thiamin phosphate from a thiazole and a pyrimidine moiety. This condensation reaction is catalyzed by thiamin phosphate synthase, which is encoded by the thiE gene o
PMID 24583237

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★リンクテーブル★

リンク元	「Thermococcus」「Thermococcales」「サーモコッカス科」

「Thermococcus」

Thermococcaceae
Scientific classification
Domain:	Archaea
Kingdom:	Euryarchaeota
Phylum:	Euryarchaeota
Class:	Thermococci
Order:	Thermococcales
Family:	Thermococcaceae Zillig et al. 1988
Genera
	Palaeococcus Takai et al. 2000; Pyrococcus Fiala and Stetter 1986; Thermococcus Zillig 1983;