関: Cox model、hazard model、hazards model、proportional hazard model、proportional hazards model

WordNet

display (clothes) as a mannequin; "model the latest fashion"
the act of representing something (usually on a smaller scale) (同)modelling, modeling
representation of something (sometimes on a smaller scale) (同)simulation
a representative form or pattern; "I profited from his example" (同)example
a person who poses for a photographer or painter or sculptor; "the president didnt have time to be a model so the artist worked from photos" (同)poser
someone worthy of imitation; "every child needs a role model" (同)role model
a hypothetical description of a complex entity or process; "the computer program was based on a model of the circulatory and respiratory systems" (同)theoretical account, framework
a type of product; "his car was an old model"
construct a model of; "model an airplane" (同)mock up
form in clay, wax, etc; "model a head with clay" (同)mold, mould
plan or create according to a model or models (同)pattern
assume a posture as for artistic purposes; "We dont know the woman who posed for Leonardo so often" (同)pose, sit, posture
create a representation or model of; "The pilots are trained in conditions simulating high-altitude flights" (同)simulate
give pleasant proportions to; "harmonize a building with those surrounding it"
the relation between things (or parts of things) with respect to their comparative quantity, magnitude, or degree; "an inordinate proportion of the book is given over to quotations"; "a dry martini has a large proportion of gin" (同)ratio
adjust in size relative to other things
the quotient obtained when the magnitude of a part is divided by the magnitude of the whole
magnitude or extent; "a building of vast proportions" (同)dimension
harmonious arrangement or relation of parts or elements within a whole (as in a design); "in all perfectly beautiful objects there is found the opposition of one part to another and a reciprocal balance"- John Ruskin (同)proportionality, balance
a source of danger; a possibility of incurring loss or misfortune; "drinking alcohol is a health hazard" (同)jeopardy, peril, risk, endangerment
an obstacle on a golf course
a particular functioning condition or arrangement; "switched from keyboard to voice mode"
the most frequent value of a random variable (同)modal value
any of various fixed orders of the various diatonic notes within an octave (同)musical mode
having a constant ratio
one of the quantities in a mathematical proportion
properly related in size or degree or other measurable characteristics; usually followed by `to; "the punishment ought to be proportional to the crime"; "earnings relative to production" (同)relative

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(通名縮小した)(…の)『模型』,ひな型《+『of』+『名』》 / 《単数形で》(…の)『模範』,手本《+『of』+(『for』)+『名』》 / (美術家・作家などの)モデル,ファッションモデル / (自動車・服装などの)型,式《+『of』+『名』》 / 《英》《単数形で》(…と)そっくりな人(物),(…の)生き写し《+『of』+『名』》 / 『模型の』,見本の / 『日範的な』,申し分のない / (ある材料で)…‘の'模型を作る,‘を'型どる《+『名』+『in』+『名』〈材料〉》 / (手本・型に合わせて)…‘を'作る《+『名』+『after』(『on, upon』)+『名』(a person's do『ing』)》 / 〈洋装・髪型などの〉‘の'モデルをする / (…で)(原型)を作る《+『in』+『名』》 / (ファッションショーなどで)モデルをする
《the~》(…に対する…の)『割合』,比率《+『of』+『名』+『to』+『名』》 / 〈U〉(…との)『調和』,均衡《+『to』+『名』》 / 〈C〉部分;割り前,分け前 / 《複数形で》大きさ / 〈U〉比例 / …‘の'調和をとる;(…に)…‘を'釣り合わせる《+『名』+『to』+『名』》
危険,冒険;(…にとっての)危険物《+『to』+『名』》 / (ゴルフや障害レースの)障害物 / 〈生命・財産など〉‘を'危険にさらす / …‘を'思い切ってする(言う)
〈C〉(…の)『方法』,やり方,流儀《+『of』+『名』(do『ing』)》 / 〈U〉〈C〉(服装などの)『流行』,モード / 〈C〉(動詞の)法,叙法(mood) / 音階(scale)
比例の,比例による;(…と)比例として《+『to』+『名』》 / 釣り合った,調和した;(…に)釣り合った《+『to』+『名』》

Wikipedia preview

出典(authority):フリー百科事典『ウィキペディア（Wikipedia）』「2014/09/04 00:38:16」(JST)

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Proportional hazards models are a class of survival models in statistics. Survival models relate the time that passes before some event occurs to one or more covariates that may be associated with that quantity of time. In a proportional hazards model, the unique effect of a unit increase in a covariate is multiplicative with respect to the hazard rate. For example, taking a drug may halve one's hazard rate for a stroke occurring, or, changing the material from which a manufactured component is constructed may double its hazard rate for failure. Other types of survival models such as accelerated failure time models do not exhibit proportional hazards. The accelerated failure time model describes a situation where the biological or mechanical life history of an event is accelerated.

Introduction

Survival models can be viewed as consisting of two parts: the underlying hazard function, often denoted , describing how the risk of event per time unit changes over time at baseline levels of covariates; and the effect parameters, describing how the hazard varies in response to explanatory covariates. A typical medical example would include covariates such as treatment assignment, as well as patient characteristics such as age at start of study, gender, and the presence of other diseases at start of study, in order to reduce variability and/or control for confounding.

The proportional hazards condition^[1] states that covariates are multiplicatively related to the hazard. In the simplest case of stationary coefficients, for example, a treatment with a drug may, say, halve a subject's hazard at any given time , while the baseline hazard may vary. Note however, that this does not double the life time of the subject; the precise effect of the covariates on the life time depends on the type of . Of course, the covariate is not restricted to binary predictors; in the case of a continuous covariate , it is typically assumed that the hazard responds logarithmically; each unit increase in results in proportional scaling of the hazard. The Cox partial likelihood shown below, is obtained by using Breslow's estimate of the baseline hazard function, plugging it into the full likelihood and then observing that the result is a product of two factors. The first factor is the partial likelihood shown below, in which the baseline hazard has "canceled out". The second factor is free of the regression coefficients and depends on the data only through the censoring pattern. The effect of covariates estimated by any proportional hazards model can thus be reported as hazard ratios.

Sir David Cox observed that if the proportional hazards assumption holds (or, is assumed to hold) then it is possible to estimate the effect parameter(s) without any consideration of the hazard function. This approach to survival data is called application of the Cox proportional hazards model,^[2] sometimes abbreviated to Cox model or to proportional hazards model. However, Cox also noted that biological interpretation of the proportional hazards assumption can be quite tricky.^[3] ^[4]

The partial likelihood

Let Y_i denote the observed time (either censoring time or event time) for subject i, and let C_i be the indicator that the time corresponds to an event (i.e. if C_i = 1 the event occurred and if C_i = 0 the time is a censoring time). The hazard function for the Cox proportional hazard model has the form

\lambda(t|X) = \lambda_0(t)\exp(\beta_1X_1 + \cdots + \beta_pX_p) = \lambda_0(t)\exp(\beta^\prime X).

This expression gives the hazard at time t for an individual with covariate vector (explanatory variables) X. Based on this hazard function, a partial likelihood can be constructed from the datasets as

L(\beta) = \prod_{i:C_i=1}\frac{\theta_i}{\sum_{j:Y_j\ge Y_i}\theta_j},

where θ_j = exp(β^′X_j) and X₁, ..., X_n are the covariate vectors for the n independently sampled individuals in the dataset (treated here as column vectors).

The corresponding log partial likelihood is

\ell(\beta) = \sum_{i:C_i=1} \left(\beta^\prime X_i - \log \sum_{j:Y_j\ge Y_i}\theta_j\right).

This function can be maximized over β to produce maximum partial likelihood estimates of the model parameters.

The partial score function is

\ell^\prime(\beta) = \sum_{i:C_i=1} \left(X_i - \frac{\sum_{j:Y_j\ge Y_i}\theta_jX_j}{\sum_{j:Y_j\ge Y_i}\theta_j}\right),

and the Hessian matrix of the partial log likelihood is

\ell^{\prime\prime}(\beta) = -\sum_{i:C_i=1} \left(\frac{\sum_{j:Y_j\ge Y_i}\theta_jX_jX_j^\prime}{\sum_{j:Y_j\ge Y_i}\theta_j} - \frac{\sum_{j:Y_j\ge Y_i}\theta_jX_j\times \sum_{j:Y_j\ge Y_i}\theta_jX_j^\prime}{[\sum_{j:Y_j\ge Y_i}\theta_j]^2}\right).

Using this score function and Hessian matrix, the partial likelihood can be maximized using the Newton-Raphson algorithm. The inverse of the Hessian matrix, evaluated at the estimate of β, can be used as an approximate variance-covariance matrix for the estimate, and used to produce approximate standard errors for the regression coefficients.

Tied times

Several approaches have been proposed to handle situations in which there are ties in the time data. Breslow's method describes the approach in which the procedure described above is used unmodified, even when ties are present. An alternative approach that is considered to give better results is Efron's method.^[5] Let t_j denote the unique times, let H_j denote the set of indices i such that Y_i = t_j and C_i = 1, and let m_j = |H_j|. Efron's approach maximizes the following partial likelihood.

L(\beta) = \prod_j \frac{\prod_{i\in H_j}\theta_i}{\prod_{\ell=0}^{m-1}[\sum_{i:Y_i\ge t_j}\theta_i - \frac{\ell}{m}\sum_{i\in H_j}\theta_i] }.

The corresponding log partial likelihood is

\ell(\beta) = \sum_j \left(\sum_{i\in H_j} \beta^\prime X_i -\sum_{\ell=0}^{m-1}\log\left(\sum_{i:Y_i\ge t_j}\theta_i - \frac{\ell}{m}\sum_{i\in H_j}\theta_i\right)\right),

the score function is

\ell^\prime(\beta) = \sum_j \left(\sum_{i\in H_j} X_i -\sum_{\ell=0}^{m-1}\frac{\sum_{i:Y_i\ge t_j}\theta_iX_i - \frac{\ell}{m}\sum_{i\in H_j}\theta_iX_i}{\sum_{i:Y_i\ge t_j}\theta_i - \frac{\ell}{m}\sum_{i\in H_j}\theta_i}\right),

and the Hessian matrix is

\ell^{\prime\prime}(\beta) = -\sum_j \sum_{\ell=0}^{m-1} \left(\frac{\sum_{i:Y_i\ge t_j}\theta_iX_iX_i^\prime - \frac{\ell}{m}\sum_{i\in H_j}\theta_iX_iX_i^\prime}{\phi_{j,\ell,m}} - \frac{Z_{j,\ell,m}\times Z_{j,\ell,m}^\prime}{\phi_{j,\ell,m}^2}\right),

where

\phi_{j,\ell,m} = \sum_{i:Y_i\ge t_j}\theta_i - \frac{\ell}{m}\sum_{i\in H_j}\theta_i

Z_{j,\ell,m} = \sum_{i:Y_i\ge t_j}\theta_iX_i - \frac{\ell}{m}\sum_{i\in H_j}\theta_iX_i.

Note that when H_j is empty (all observations with time t_j are censored), the summands in these expressions are treated as zero.

Time-varying predictors and coefficients

Extensions to time dependent variables, time dependent strata, and multiple events per subject, can be incorporated by the counting process formulation of Andersen and Gill.^[6]

In addition to allowing time-varying covariates (i.e., predictors), the Cox model may be generalized to time-varying coefficients as well. That is, the proportional effect of a treatment may vary with time; e.g. a drug may be very effective if administered within one month of morbidity, and become less effective as time goes on. The hypothesis of no change with time (stationarity) of the coefficient may then be tested. Details and software are available in Martinussen and Scheike (2006).^[7]

In this context, it could also be mentioned that it is theoretically possible to specify the effect of covariates by using additive hazards,^[8] i.e. specifying

\lambda(t|X) = \lambda_0(t) + \beta_1X_1 + \cdots + \beta_pX_p = \lambda_0(t) + \beta^\prime X.

However, care must be taken to restrict to non-negative values, if such additive hazards models are used. Perhaps as a result of this complication, such models are seldom seen.

Specifying the baseline hazard function

The Cox model may be specialized if a reason exists to assume that the baseline hazard follows a particular form. In this case, the baseline hazard is replaced by a given function. For example, assuming the hazard function to be the Weibull hazard function gives the Weibull proportional hazards model.

Incidentally, using the Weibull baseline hazard is the only circumstance under which the model satisfies both the proportional hazards, and accelerated failure time models.

The generic term parametric proportional hazards models can be used to describe proportional hazards models in which the hazard function is specified. The Cox proportional hazards model is sometimes called a semiparametric model by contrast.

Some authors (e.g. Bender, Augustin and Blettner^[9]) use the term Cox proportional hazards model even when specifying the underlying hazard function, to acknowledge the debt of the entire field to David Cox.

The term Cox regression model (omitting proportional hazards) is sometimes used to describe the extension of the Cox model to include time-dependent factors. However, this usage is potentially ambiguous since the Cox proportional hazards model can itself be described as a regression model.

Relationship to Poisson models

There is a relationship between proportional hazards models and Poisson regression models which is sometimes used to fit approximate proportional hazards models in software for Poisson regression. The usual reason for doing this is that calculation is much quicker. This was more important in the days of slower computers but can still be useful for particularly large data sets or complex problems. Authors giving the mathematical details include Laird and Olivier (1981),^[10] who remark

"Note that we do not assume [the Poisson model] is true, but simply use it as a device for deriving the likelihood."

The book on generalized linear models by McCullagh and Nelder^[11] has a chapter on converting proportional hazards models to generalized linear models.

Notes

^ Breslow, N. E. (1975). "Analysis of Survival Data under the Proportional Hazards Model". International Statistical Review / Revue Internationale de Statistique 43 (1): 45–57. doi:10.2307/1402659. JSTOR 1402659.
^ Cox, David R (1972). "Regression Models and Life-Tables". Journal of the Royal Statistical Society, Series B 34 (2): 187–220. JSTOR 2985181. MR 0341758
^ Reid, N. (1994). "A Conversation with Sir David Cox". Statistical Science 9 (3): 439–455. doi:10.1214/ss/1177010394.
^ Cox, D. R. (1997). "Some remarks on the analysis of survival data". the First Seattle Symposium of Biostatistics: Survival Analysis.
^ Efron, Bradley (1974). "The Efficiency of Cox's Likelihood Function for Censored Data". Journal of the American Statistical Association 72 (359): 557–565. JSTOR 2286217.
^ Andersen, P.; Gill, R. (1982). "Cox's regression model for counting processes, a large sample study.". Annals of Statistics 10 (4): 1100–1120. doi:10.1214/aos/1176345976. JSTOR 2240714.
^ Martinussen & Scheike (2006) Dynamic Regression Models for Survival Data (Springer).
^ Cox, D. R. (1997). "Some remarks on the analysis of survival data". the First Seattle Symposium of Biostatistics: Survival Analysis.
^ Bender, R., Augustin, T. and Blettner, M. (2006). Generating survival times to simulate Cox proportional hazards models, Statistics in Medicine 2005; 24:1713–1723. doi:10.1002/sim.2369
^ Nan Laird and Donald Olivier (1981). "Covariance Analysis of Censored Survival Data Using Log-Linear Analysis Techniques". Journal of the American Statistical Association 76 (374): 231–240. doi:10.2307/2287816. JSTOR 2287816.
^ P. McCullagh and J. A. Nelder (2000). "Chapter 13: Models for Survival Data". Generalized Linear Models (Second ed.). Boca Raton, Florida: Chapman & Hall/CRC. ISBN 0-412-31760-5. (Second edition 1989; first CRC reprint 1999.)

References

Bagdonavicius, V.; Levuliene, R.; Nikulin, M. (2010). "Goodness-of-fit criteria for the Cox model from left truncated and right censored data". Journal of Mathematical Sciences 167 (4): 436–443. doi:10.1007/s10958-010-9929-6.
Cox, D. R.; Oakes, D. (1984). Analysis of Survival Data. New York: Chapman & Hall. ISBN 041224490X.
Collett, D. (2003). Modelling Survival Data in Medical Research (2nd ed.). Boca Raton: CRC. ISBN 1584883251.
Therneau, T. M.; Grambsch, P. M. (2000). Modeling Survival Data: Extending the Cox Model. New York: Springer. ISBN 0387987843.

UpToDate Contents

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1. 生物統計学および疫学に関する一般用語集 glossary of common biostatistical and epidemiological terms
2. COX-2選択的阻害剤の概要 overview of selective cox 2 inhibitors
3. 非ステロイド性抗炎症剤（NSAIDs）：作用機序 nsaids mechanism of action
4. 小細胞肺癌の病理および病期分類 pathobiology and staging of small cell carcinoma of the lung
5. 食道表在癌のマネージメント management of superficial esophageal cancer

English Journal

Dietary acrylamide and risk of prostate cancer.

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International journal of cancer. Journal international du cancer.Int J Cancer.2012 Jul 15;131(2):479-87. doi: 10.1002/ijc.26383. Epub 2011 Sep 14.
Acrylamide has been designated by IARC as a "probable human carcinogen." High levels are formed during cooking of many commonly consumed foods including French fries, potato chips, breakfast cereal and coffee. Two prospective cohort studies and two case-control studies in Europe found no association
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Intake of dietary fiber, especially from cereal foods, is associated with lower incidence of colon cancer in the HELGA cohort.

Hansen L, Skeie G, Landberg R, Lund E, Palmqvist R, Johansson I, Dragsted LO, Egeberg R, Johnsen NF, Christensen J, Overvad K, Tjønneland A, Olsen A.SourceDanish Cancer Society, Institute of Cancer Epidemiology, Copenhagen, Denmark. louhan@cancer.dk.
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PMID 21866547

Japanese Journal

Optimal inferences for proportional hazards model with parametric covariate transformations

Fan Chunpeng,Fine Jason P.,Jeong Jong-Hyeon
Annals of the Institute of Statistical Mathematics 64(4), 715-736, 2012-08
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リンク元	「Cox model」「proportional hazards model」「コックス比例ハザードモデル」「hazard model」「hazards model」
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